Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00426 ATGGAGCCGTCTAACGGGCCTTTGCTACCGACTAAAGGTTCTGATGAGTTCAAACCGTTCATTCGTCGACTGCCTGAGTTTAAGTTCTGGTATTCTTTCACAAAGGCTTTCTGCATAGCGTTTGTGATGACTTTCTTTTCTGTATTTGATGTTCCCGTTTTTTGGCCAATATTACTCTGTTACTGGGTTGTTCTATTTGTTCTTACAATGAGGCGCCAAATTGCACACATGATCAAATACAAATATATTCCGTTCAACATTGGAAAGCAGAAGTATAGTGGCAAAAAGTCTTATGCAAGCAGCAGCGGCACCCGTGCCGACTGA 324 0.4228 MEPSNGPLLPTKGSDEFKPFIRRLPEFKFWYSFTKAFCIAFVMTFFSVFDVPVFWPILLCYWVVLFVLTMRRQIAHMIKYKYIPFNIGKQKYSGKKSYASSSGTRAD 107
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00426 107 PANTHER PROTEIN RER1 6 107 IPR004932 GO:0016021
Cca04g00426 107 Pfam Rer1 family 4 93 IPR004932 GO:0016021
Cca04g00426 107 PANTHER PROTEIN RER1B 6 107 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00426 Cca-Chr4 4241908 4243969 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00426 1 107 Miscellaneous Gene Families AT2G21600 85.185 1.05e-64 192
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00426 - - gmx:100499996 200.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00426 04 4241908 4243969 Cca04g00426 04 4241908 4243969 ECH