Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00422 ATGGCATTGAACACAAAATCCCATTTCCATGCACGTTCAAACAGCTTGCCCTCTAGACCACACCCTCTCATCCTACAATGCAATGAGCACTTGGACAGGTTAAGGGCTTCCCATGAGACCTCTTCTTCCTCTTCATCGCTTAGCCATAAGCTAGGAGGGTTGCAAGATCTGCATGAATGTGTTGAAAAATTGTTCCAGCTTCCCCTCACCCAAGAAGCACTTCACCACGAGTCTCAAGAAAAGTGGGTTGATGAGCTTCTGAATGGATCCTTAAGGGTCTTAGATGTGTGCACTGCCACCAAAGACTCTCTACTGCATACAAAAGAGTGCATGCGTGATCTTCAATCAATTATGAGAAGGAGAAAGGGGGGTGAAGTGGCAGAGATTAAGAAGTTCTTGACTTCAAGGAAGGTGGTGAAAAAGGCCATCTCGAAAGCCTTGGAAAATTTGAAGGCTACTTAA 462 0.4524 MALNTKSHFHARSNSLPSRPHPLILQCNEHLDRLRASHETSSSSSSLSHKLGGLQDLHECVEKLFQLPLTQEALHHESQEKWVDELLNGSLRVLDVCTATKDSLLHTKECMRDLQSIMRRRKGGEVAEIKKFLTSRKVVKKAISKALENLKAT 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00422 153 Pfam Protein BPS1 50 152 IPR004320 GO:0048364|GO:0048367
Cca04g00422 153 PANTHER DUF241 DOMAIN PROTEIN 2 153 - -
Cca04g00422 153 PANTHER BPS1-LIKE PROTEIN 2 153 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00422 Cca-Chr4 4206432 4206893 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00422 - - gmx:100802945 263.848