Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00420 ATGGCATTGAACACAAAATCCCATTTCCATGTACGTTCAAACAGCTTGCCCTCTAGACCACACCCTCTCATCCTACAATGCAATGAGCACTTGGACAGGTTAAGGGCTTCCCATGAAACCTCTTCTTCCTGTTCATCGCTTAGCCATAAGCTAGGAGGGTTGCAAGATCTGCATGTATGTGTTGAAAATTTGTTCCAGCTTCCCCTCACCCAAGAAGCACTTCACCACGAGTCTCAAGAAAAGTGGGTTGATGAGCTTCTGAATGGATCCTTAAGGGTCTTAGATGTGTGCACTGCCACCAAAGACTCTCTACTGCATACAAAAGAGTGCATGCGTGATCTTCAATCAATTATGAGAAGGAGAAAGGGGGGTGAAGTGGCAGAGATTAAGAAGTTCTTGACTTCAAGGAAGGTGGTGAAAAAGGCCATCTCGAAAGCCTTGGAAAATTTGAAGGCTACTTCAAAACATGGCAACATCTCATCCACAAACAAAGGCAATCAAACAGTGGCTTTGATTAGTTTATTAGAGAATGTGGAAGTGGTCACTCTTTCAACATTTCAGGCATTAATGCAATTCATCTCAGGGACTACTCAATCAAAATCAAGCAGTTGGGTTTTGGTTTCCAAGCTAATGCAGACCAAGAAAGTCGGTTGCTCACAATTGGCAGATCATGAAAGTGAATTTGCCCAACTTGACGAAGCATTGCAATCCTGCATGTTTTCCCAGACAAGCAAAATTGAAAACATGAATAAGCTTCAAAACCAATTGGAGAAAATAGAGTCTCTTACTCAAGATCTTGAAGAAGGGCTTGAGTTTCTGTTTAGGCATTTGATAAAGACTAGAGTTGCCCTTCTTAACATCCTCAATCACTAG 873 0.4204 MALNTKSHFHVRSNSLPSRPHPLILQCNEHLDRLRASHETSSSCSSLSHKLGGLQDLHVCVENLFQLPLTQEALHHESQEKWVDELLNGSLRVLDVCTATKDSLLHTKECMRDLQSIMRRRKGGEVAEIKKFLTSRKVVKKAISKALENLKATSKHGNISSTNKGNQTVALISLLENVEVVTLSTFQALMQFISGTTQSKSSSWVLVSKLMQTKKVGCSQLADHESEFAQLDEALQSCMFSQTSKIENMNKLQNQLEKIESLTQDLEEGLEFLFRHLIKTRVALLNILNH 290
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00420 290 PANTHER BPS1-LIKE PROTEIN 2 289 - -
Cca04g00420 290 Pfam Protein BPS1 50 287 IPR004320 GO:0048364|GO:0048367
Cca04g00420 290 Coils Coil 242 269 - -
Cca04g00420 290 PANTHER DUF241 DOMAIN PROTEIN 2 289 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00420 Cca-Chr4 4199567 4200590 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00420 - - gmx:100802945 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00420 04 4199567 4200590 Cca04g00420 04 4199567 4200590 ECH