Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00419 ATGGCAGCCATTGAAAAGAAAACACATCTTCGCAGCAACAGCTTGCCCTCTGCAGCTCACCCTCTTGTTTCACAATTTGAGGAGCATTTGCAAAGATTGAAGGGTTCTGAAGCCACTTCTTTGCTGTCATCATCTTCAGTGTGCCACAAACTTAATGACATGCTGGATTTGCATGACTGCACTGATAAGTTGCTTCAATTGCCAATAGAACAACAAGCCTTAGCACAAGAGTGCAATGGCAAATGTGTTGATGAACTACTAGAAGGGTCTCTTAGGCTCTTAGATATCTGCAGTGTAGCTAAAGATTGCCTTCTGCAATCAAAGGAAAGCATGTGTGACTTAAAGTCAGTCATCCGAAGAAGGAAAGGCAACGAAACTGGATTCATGGTTGAGGGTGTAAAATACTTGGCTTTGAGGAAAAAGATGAAGAAGCAAATTCAAAAGGCCTTGCAAAATATGAAAAGTGTACTCATAGCTTCTTCAGAAAATGACAACACTTCAATTCTCAGCTTCTTAAAAGAAGCAGAAGTAGTCACCTTGAGCTCATTAGAACATTTGTTGCTGTTTATATCTGGCTCAAAAGGACACTCAAAGCATAGCAGATGGTCAGCAATATCCAAGTTGGTGCATCCAAAAAGAGTAGTTTGTGACTCTCAAGAATCAAACTCAAATGAATTTCAAAAGGTGGATGCAGCTCTGCAGTCTCTCATCCGTCACAAGCCTTCATCTCTTGAGAATTTTCATAGTCACGTGGAAAATTTGGAGCTGTGCATTCAAGATCTAGAAATAGGACTTGATCACCTCTCAAGAAAATTAATTAGAAACAGAGTTTCCCTTCTTAACATCTTCAACCACTAA 858 0.3998 MAAIEKKTHLRSNSLPSAAHPLVSQFEEHLQRLKGSEATSLLSSSSVCHKLNDMLDLHDCTDKLLQLPIEQQALAQECNGKCVDELLEGSLRLLDICSVAKDCLLQSKESMCDLKSVIRRRKGNETGFMVEGVKYLALRKKMKKQIQKALQNMKSVLIASSENDNTSILSFLKEAEVVTLSSLEHLLLFISGSKGHSKHSRWSAISKLVHPKRVVCDSQESNSNEFQKVDAALQSLIRHKPSSLENFHSHVENLELCIQDLEIGLDHLSRKLIRNRVSLLNIFNH 285
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00419 285 Coils Coil 251 271 - -
Cca04g00419 285 PANTHER DUF241 DOMAIN PROTEIN 5 284 - -
Cca04g00419 285 Pfam Protein BPS1 50 282 IPR004320 GO:0048364|GO:0048367
Cca04g00419 285 PANTHER BPS1-LIKE PROTEIN 5 284 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00419 Cca-Chr4 4195616 4196473 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00419 - - gmx:100783166 433.721
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00419 04 4195616 4196473 Cca04g00419 04 4195616 4196473 ECH