Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00418 ATGGCAGCCACTTCTTTTAGCCCAAAATCTCATTCTCATCCCCAATCTCGCTCAAAGAGCTTGCCATGTAGACCACACCCTCTTATCCTACAATGCAACCAACATTTGGGAAGTTTAGAGGCTTCTGATGCCACTTCCTCTTCATCATCATTGTTCAGACACAAACTAACTGGCCTGCAGACTCTGCATGATTGTATTGAAAACCTTGTTCTTCTGCCTCTTACTCAAGAAGTCCTAGTCCAAGAGCGTCAAGAGAAGTGGGTTGATGAGCTTCTGGATGGATCTTTAAGGCTCCTAGATGTGTGTACTGTTGCAAAGGATGCTCTACTTCACACAAAGGAATGTGTGCGCGAACTTCAATCGATTATGAGAAGAAAAAGGGGAGGTGAAATGGAGATTGCAGCTGAGGTCAGGAAGTTCTTGGCCTCTAGGAAGGTAGTAAAGAAGGCAATCCTCAAAGCGTTGGAGAATTTACAAGTGACTGTGAAGAAAGCAAAATTTGCTCCTAGCAACAAGGACCATCCAACCGCAACTTTGGCTAGCTTGTTCAAAGATGTGCAAGTAATCACTCTTTCCATAATGGAGTCACTGCTGAACTTCATTTCTGGACCAGCACAATCAAAACCAAGTAAATGGTCTTTGGTTTCCAAGCTAATGCAGAACAAGAAGGTTATTTGCACACTAGAGTCGGATAAGAATGAATTTTCCAATGTAGATGCTGCATTGCAATCGTTTGTGTTTCATGTGACAAGAAAGTCAGACAGTATCAATCATTTGCAGAACCAGTTGGAAGATCTAGAGTCAGTCATTCAAGACTTTGTGGAAGGACTTGAAACTCTTTTTAAACGTTTTATCAAAATTAGAGTTTCCCTTCTCAACACCCTCAATCACTAA 894 0.4183 MAATSFSPKSHSHPQSRSKSLPCRPHPLILQCNQHLGSLEASDATSSSSSLFRHKLTGLQTLHDCIENLVLLPLTQEVLVQERQEKWVDELLDGSLRLLDVCTVAKDALLHTKECVRELQSIMRRKRGGEMEIAAEVRKFLASRKVVKKAILKALENLQVTVKKAKFAPSNKDHPTATLASLFKDVQVITLSIMESLLNFISGPAQSKPSKWSLVSKLMQNKKVICTLESDKNEFSNVDAALQSFVFHVTRKSDSINHLQNQLEDLESVIQDFVEGLETLFKRFIKIRVSLLNTLNH 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00418 297 PANTHER BPS1-LIKE PROTEIN 1 297 - -
Cca04g00418 297 MobiDBLite consensus disorder prediction 1 19 - -
Cca04g00418 297 Coils Coil 249 276 - -
Cca04g00418 297 MobiDBLite consensus disorder prediction 1 23 - -
Cca04g00418 297 Pfam Protein BPS1 55 293 IPR004320 GO:0048364|GO:0048367
Cca04g00418 297 PANTHER DUF241 DOMAIN PROTEIN 1 297 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00418 Cca-Chr4 4191843 4192776 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00418 - - gmx:100782625 509.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00418 04 4191843 4192776 Cca04g00418 04 4191843 4192776 ECH