Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00417 ATGGAAACAAGCACAAAGAACTCTCTGCACATTCGATGCAACAGTTTACCCTCATCACCTCACCCTCTTGTATCACAATTCCAGGAGCACTTGCAGAGATTGAAGGATTCTGAAGCAACCAGCACTTCTTTGTCATCGTCTTCAATAAGCCAAAAACTAATTGGCGTGCAGGATTTGCATGACTATGCTGATAAGTTGCTCCAGTTGCCCACTACTCAACAAGCCTTTGCTCTACAATGCAGTGACAAGTTGGTTGATGTCCTCTTAGAAGGCGCTCTGGGGCTTCTGGATATCTGTAGTATAGCCCAAGATTGTCTCTTGCAATCAAAGGAAAACATTCACACGGTTAAGTCAGTAATCCGGAGGAAGGGTGCTGACACAGAATTCGCAGCTGAGTGTGGAAAATACTTGGCATCTAGGAAGAAGATGAAGAAGACAATTCAAAAGGCCTTAGGCAGTTTGAAAGGAAAGAAAAATGAGTTAATGATTGTCTCCTCAAGCAAAGATAATGAGGTTTTGTCTATCCTTGGCATGTTAAAAGAAGCAGAAGCAGTCACTGTAAGGTCATTAGAATCTTTGTTGCTGTTTGTCTCTGATACCAGGGGACAATCAAAGCAGAGAAGATGGTCAATAATCTCTAAGTTGATGCAGCCTGATACAATGACTTGTGACTCTCAAGAATCAGACTCAAATGAATTTGTAACGGTGGATACAGCTTTACAATCACTCATCACTCACAAGCCTTTATCTGTTGAGAATCTTCACAGCCATGTGGAAAATTTGGAGATATGCATTGAGGATCTAGAAGTAGATGTTGAACACCTTTCAAGGCAACTCATTAGAACAAGAGTTTCCCTTCTTAACATCTTCAGCCACTAG 879 0.4152 METSTKNSLHIRCNSLPSSPHPLVSQFQEHLQRLKDSEATSTSLSSSSISQKLIGVQDLHDYADKLLQLPTTQQAFALQCSDKLVDVLLEGALGLLDICSIAQDCLLQSKENIHTVKSVIRRKGADTEFAAECGKYLASRKKMKKTIQKALGSLKGKKNELMIVSSSKDNEVLSILGMLKEAEAVTVRSLESLLLFVSDTRGQSKQRRWSIISKLMQPDTMTCDSQESDSNEFVTVDTALQSLITHKPLSVENLHSHVENLEICIEDLEVDVEHLSRQLIRTRVSLLNIFSH 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00417 292 Pfam Protein BPS1 52 289 IPR004320 GO:0048364|GO:0048367
Cca04g00417 292 PANTHER DUF241 DOMAIN PROTEIN 6 291 - -
Cca04g00417 292 PANTHER BPS1-LIKE PROTEIN 6 291 - -
Cca04g00417 292 Coils Coil 251 278 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00417 Cca-Chr4 4189345 4190223 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00417 - - gmx:102663177 460.299
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00417 04 4189345 4190223 Cca04g00417 04 4189345 4190223 ECH