Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00416 ATGGCAGTTGGTGAAACAAACACAAAAAGCTCTCTTCATCTTCGCAGCAACAGCTTGCCCTCTGCACCTCACCCCTTTACATCACAATTTGAAGAGCATTTACAAAGATTGAAGGATTCTGAAGCCACATCTTCTTTGACATCATCTTCAATAAACTACAAGCTAAATGGCTTGCGGGATTTGCATGAGTGTGCTGATAAGCTTCTCCAATTGCCAATCACTCAGCAAGCCTTGGCAGGAGAATGTAGCAACAAATGTGTTGATGAACTATTAGATGGATCTGTGAGGATCTTGGATATTTGTGATACAATTAAAGATTGTCTAGTGCAACAAAAGGAAAACATGCATGAACTTGAGTCAGCTATTCGCCGGCGAAGAGATGCTAAAGATGGATTATTAATTGAAAGTGGAAAATACTTGGCATCTAGGAAGCAGATGAAAAAAGTGATTCGGAAGGCCTTAGGAAATTTGAAAGGATTCAAGAATGAGCTCATGGTTGCTTCCTCAAACAAAAACAATAAAACATTGTCCATGCTTGGAATCTTAAAAGAATCAGAAGTAGTCACCATGAGCTCATTAGAATCCCTGTTGTTGTTTATAACTGGCTCAAAGGGACAATCAAAACAGAACAGACGGTCAATAATCTCCAAGTTGATGCAACCAAATACATTGGGATGTGACTTTCCAGAGGCTGACACAAATGTAATTGAAAAGGTGGATGCTGCTTTGATGTCTCTCATCAATCACAAGCCTTCGCCTATTGATAATTTTCAAAGCCATTTGGAAAATTTGGAGATATGCATTCAGAATTTAGAAGTAGGAGTTGAATACCTCTCAAGGCAACTAATTAGAACCAGAGTTTCCCTTCTCAACATCTTCAATCACTAG 888 0.3896 MAVGETNTKSSLHLRSNSLPSAPHPFTSQFEEHLQRLKDSEATSSLTSSSINYKLNGLRDLHECADKLLQLPITQQALAGECSNKCVDELLDGSVRILDICDTIKDCLVQQKENMHELESAIRRRRDAKDGLLIESGKYLASRKQMKKVIRKALGNLKGFKNELMVASSNKNNKTLSMLGILKESEVVTMSSLESLLLFITGSKGQSKQNRRSIISKLMQPNTLGCDFPEADTNVIEKVDAALMSLINHKPSPIDNFQSHLENLEICIQNLEVGVEYLSRQLIRTRVSLLNIFNH 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00416 295 PANTHER BPS1-LIKE PROTEIN 9 294 - -
Cca04g00416 295 MobiDBLite consensus disorder prediction 1 25 - -
Cca04g00416 295 PANTHER DUF241 DOMAIN PROTEIN 9 294 - -
Cca04g00416 295 Pfam Protein BPS1 54 292 IPR004320 GO:0048364|GO:0048367
Cca04g00416 295 Coils Coil 108 128 - -
Cca04g00416 295 MobiDBLite consensus disorder prediction 1 26 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00416 Cca-Chr4 4184306 4185193 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00416 - - gmx:102662897 426.402
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00416 04 4184306 4185193 Cca04g00416 04 4184306 4185193 ECH