Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00415 ATGGCTACAAACATGAAAACATCACACAGTCGCTCCAATAGTGTGCCCTCTGCACCTCACCCTCTCATATCACAACATGATGAGCACTTGAACAGATTGAAGGCTTCTGAAGCCACCTCCTCATCATCAATAAGCAGTAAACTCAATGTTTTGCATGCTTTGCATGAACTTACTGACAAGATTCTTCAATTGCCAACCATACAACAAGCCATGGCACAAGAATCCTGCAAAACATGGGTTGATGAATTACTAGAAGGGTCTCTGAGGCTCCTTGATATCTGTAGTACTGCCAAGGATGTCCTGCTAAAATCTACAGAAAGCATAAATGGACTTCAGTGCAGGAGGAGAGGTGGTGAAGAAGCATTCAAAGTTGAGGGTGGCAAATACTTGTCATCAAGGAAGAATGCAAAGAAGACTATTCAGAAGGCCTTTGAAAAATTCAAGGGATTTAAGAAGGGTATCGTTTTAACTTCCTCTAACACAGACAATGAGACTTTGTCAATGATCAGCAAATTCAAAGAAGCTGAAACTGTCTCTTTGGTTCAACTCGAGTCTTTGTTATCTTTTATGTCTGGCTCAGGAGGAAAACCAAAAGACAGAAGGTGGTTGATTTTCTCCAAGTTGATGCAGCTTAATAGAGTATACTGTGTTTTTGACCAATCAAACACAAATGAATTTGAGGAGGTGGATACAGCATTGCAGTCTCTCTTTCACAAGACTTGCTGTAATGTTTCTGTTGAGATTTTCCAAAATCATATGGAAAATTTGGAGTTGTGCATTCAGGGTCTGGAGGCAGGAATTGAGCGCCTTGAAAGGCAACTGATTAGGACAAGAGTTTCTCTTCTCAACATCTATAATCACTGA 864 0.4051 MATNMKTSHSRSNSVPSAPHPLISQHDEHLNRLKASEATSSSSISSKLNVLHALHELTDKILQLPTIQQAMAQESCKTWVDELLEGSLRLLDICSTAKDVLLKSTESINGLQCRRRGGEEAFKVEGGKYLSSRKNAKKTIQKAFEKFKGFKKGIVLTSSNTDNETLSMISKFKEAETVSLVQLESLLSFMSGSGGKPKDRRWLIFSKLMQLNRVYCVFDQSNTNEFEEVDTALQSLFHKTCCNVSVEIFQNHMENLELCIQGLEAGIERLERQLIRTRVSLLNIYNH 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00415 287 Pfam Protein BPS1 47 284 IPR004320 GO:0048364|GO:0048367
Cca04g00415 287 PANTHER DUF241 DOMAIN PROTEIN 6 286 - -
Cca04g00415 287 MobiDBLite consensus disorder prediction 1 20 - -
Cca04g00415 287 Coils Coil 253 280 - -
Cca04g00415 287 MobiDBLite consensus disorder prediction 1 23 - -
Cca04g00415 287 PANTHER BPS1-LIKE PROTEIN 6 286 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00415 Cca-Chr4 4179164 4180029 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00415 - - gmx:100787385 430.254
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00415 04 4179164 4180029 Cca04g00415 04 4179164 4180029 ECH