Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00413 ATGGACTCGTTCAGTTTCAACAACCTCCAAGCAGAGAAAGCCAACGCGATTCTGAAACACCGGAAGCTCCAAAGGGTTGCAAGCTTGCTGCGAATCCTGGAAGTGTGCGCTGTTTTGGTCTTGGTATCGAGGGTCTCCATGCATCTACCAGTTGCACTCAGAAACTCCGGCGAGTACTTCAGAGACTTGTCTCTCTTCATGCATAGTCCTCGCTTCGTTTTCTTCGTCGGAAACGTCATCATCATCACGCTCTTCGCGCAGTTCTCCGCTCAGGGCTCCGCCAGAAACCTTGGAGAACAGAACCTGTATCAGGAGTTTGTCCACAACAGCGCAAAAGATCAAAGGCACGTGGAAACGGTGGTGGTGGCAGAGTGCGGGAAAAAGAAACAGAGGATGAAAACAGGGGAGAAGAAGGTTTATAGAAGGTGTGAGACGGAAGTGGTGAGAGAGAAACGACGTCGTGTGCTGAGAAGGTGTGAGACTAAGAGGATTGAAGGTGAAGAAGTGGTGAAAGTCTCGTGCCCTGAAGATGGGATGAGTAACGAGGAGTTTCGTCGCACTGTGGAGGCTTTCATTGCAAGGCAACAGAGGATTCGAAGGGAAGAAGAAAATGATTATTATTATTATTTAATGTAA 636 0.4843 MDSFSFNNLQAEKANAILKHRKLQRVASLLRILEVCAVLVLVSRVSMHLPVALRNSGEYFRDLSLFMHSPRFVFFVGNVIIITLFAQFSAQGSARNLGEQNLYQEFVHNSAKDQRHVETVVVAECGKKKQRMKTGEKKVYRRCETEVVREKRRRVLRRCETKRIEGEEVVKVSCPEDGMSNEEFRRTVEAFIARQQRIRREEENDYYYYLM 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00413 211 PANTHER TRANSMEMBRANE PROTEIN 1 205 - -
Cca04g00413 211 Coils Coil 6 26 - -
Cca04g00413 211 PANTHER TRANSMEMBRANE PROTEIN 1 205 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00413 Cca-Chr4 4166203 4167414 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00413 - - gmx:102665576 262.692
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00413 04 4166203 4167414 Cca04g00413 04 4166203 4167414 ECH