Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00370 ATGGAAATGTGTGGAGCCACAGCTCTGACATGGTCGCACACCATCTCTCCATCCCTTCACCTTCCTCGACCACTCCCTACCAGAGAGGCTAGGACCTTCAAGGTTTTCTGTGTCTCTGATCAAGACTCCAAGGGAAATAAAATGATCATCTCTATAACTGGAGCAACCGGATTTATTGGTAAAAGGTTGGTGCAAAGACTGCAAGCAGACAATCATAGTGTTCATGTCTTGACGCGATCTAAATCTAAAGCAGAAACAATTTTTCCGGCAAAAGACTTTCCAGGAATCAAGATTGCAGAGGAGATAGAATGGAAAGATAGCATTCAGCGCTCAACGGGGGTTGTGAATTTAGCTGGATTGCCCATAAGTACCCGATGGTCTCCTGAGATAAAGAAGGAAATCAAGCAAAGCAGGATTAGAGTGACCTCGAAGGTTGTAGAATTTATAAACAGTGCACCAGATGATATTCGACCTAAAGTTTTTGTTAGTGCAACAGCTGTTGGTTATTATGGTAGCAGTGAGACACAAGTCTTTGATGAACAAAGTCCATCAGGAAAGGATTACTTGGCTGAGGTTTGTAGGGAATGGGAATCCACAGCCCTAAAGGTAAACGGAGATGTTAGAGTGGCTCTAATTCGCATTGGTGTTGTTCTTGGTAAAGATGGTGGAGCACTAGCTAAAATGATACCTTTATTCAACTTGTTTGCTGGTGGGCCTCTAGGCTCTGGAAAACAATGGTATTACACTCTGTTTCTTGTGCTTGTAAGAGATTGCTGTGTAGTACTGTTAATTCATTCTTAG 801 0.427 MEMCGATALTWSHTISPSLHLPRPLPTREARTFKVFCVSDQDSKGNKMIISITGATGFIGKRLVQRLQADNHSVHVLTRSKSKAETIFPAKDFPGIKIAEEIEWKDSIQRSTGVVNLAGLPISTRWSPEIKKEIKQSRIRVTSKVVEFINSAPDDIRPKVFVSATAVGYYGSSETQVFDEQSPSGKDYLAEVCREWESTALKVNGDVRVALIRIGVVLGKDGGALAKMIPLFNLFAGGPLGSGKQWYYTLFLVLVRDCCVVLLIHS 266
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00370 266 Pfam NAD dependent epimerase/dehydratase family 50 221 IPR001509 -
Cca04g00370 266 Gene3D - 43 264 - -
Cca04g00370 266 TIGRFAM yfcH: TIGR01777 family protein 50 247 IPR010099 -
Cca04g00370 266 PANTHER EPIMERASE FAMILY PROTEIN SDR39U1 46 248 - -
Cca04g00370 266 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 45 251 IPR036291 -
Cca04g00370 266 PANTHER SUGAR NUCLEOTIDE EPIMERASE RELATED 46 248 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00370 K07071 - gmx:100814881 459.144
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00370 04 3732759 3737981 Cca04g00370 04 3732759 3737981 ECH