Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00367 ATGGTTTatcaccataatcatcatcatcatcatcaccaACCAATGGATGAAGGGCTTCTCCTTCAAATGCTGAGGTTGGCATGGCTGGCTGCCACATTACCCATCATCATCGCTTCCATTCCCACTTCTAACCTCACTTGGCTCCGTCGCACCCTGATCGGCTTCGCTAGGAGAGGCAAAATCATGCACTCCTCCCAAAAATTCACCATTCCGCAACGATTCTTCTTGCACTTCTACGCTGTGGCTGTTGTGTGGACGACGTTGCTGCTTGTTGCGACTTGGGCTTATGCGTACAGCATGGTGCCGCTTGTTGCAGAGCCGTTTTCTTACTCCACTATTACAAGCTTCTTGACTGGGGGCTCTACTATAAGAACCGGTTCGGCTAAATTGAGGAAGGGATATGTGGCTTGGCAATCTGTTTTCATGCTTCTGTTGATGGAACTTCAAGTGCTTAGACGCCTTTATGAGAGCATTTACGTTTTTAACTACAGCCCTTCTGCTCGCATGCATGTCTTTGGTTATCTCCTTGGATATTTTTTCTACATAGCAGCACCACTCTCGCTGTGTGGCGATTGTGCAGTAGAGGTCTTTAACTACCTAGGAAATCTCCTGACCGAGTTCATTGTCAAGGGCAAGAATCAGATGCAAGTAACAGAATTAGAATTCTGGCAAGTTGTGAATCCTCTCTTCAGGCTTGGGTGGAAGCATTGGATTGGTGCAGCTGTTTTCATATGGGGTTGGATTCATCAACTTCAGTGCCATAAGATTCTTGGTTCTCTACGACATTCAAGACAAGCAGAGGAATATGTAATACCTCGTGGTGATTGGTTTGAGATCGTCTCCTCTCCACATTATCTCTCTGAAATCGTTATATACGCTAGTTTTGTGGTCGCTACTGGAGGAACCAACCTAACAATCTGGCTACTTTTTGTTTTTGTGGTAGCAAACCTATCATTTGCAGCTGTGGAAACACATAGCTGGTATCGTCAGAAATTTGAAGATTATCCAAGTAATCGGTTTGCTATAATTCCATTCATTCTGTGA 1044 0.4358 MVYHHNHHHHHHQPMDEGLLLQMLRLAWLAATLPIIIASIPTSNLTWLRRTLIGFARRGKIMHSSQKFTIPQRFFLHFYAVAVVWTTLLLVATWAYAYSMVPLVAEPFSYSTITSFLTGGSTIRTGSAKLRKGYVAWQSVFMLLLMELQVLRRLYESIYVFNYSPSARMHVFGYLLGYFFYIAAPLSLCGDCAVEVFNYLGNLLTEFIVKGKNQMQVTELEFWQVVNPLFRLGWKHWIGAAVFIWGWIHQLQCHKILGSLRHSRQAEEYVIPRGDWFEIVSSPHYLSEIVIYASFVVATGGTNLTIWLLFVFVVANLSFAAVETHSWYRQKFEDYPSNRFAIIPFIL 347
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00367 347 ProSiteProfiles Steroid 5-alpha reductase C-terminal domain profile. 239 322 IPR001104 GO:0006629|GO:0016627
Cca04g00367 347 Gene3D - 213 346 - -
Cca04g00367 347 PANTHER DFG10 PROTEIN 20 346 IPR039698 GO:0003865|GO:0006488
Cca04g00367 347 Pfam 3-oxo-5-alpha-steroid 4-dehydrogenase 233 347 IPR001104 GO:0006629|GO:0016627
Cca04g00367 347 PANTHER POLYPRENOL REDUCTASE 2-LIKE 20 346 - -
Cca04g00367 347 Coils Coil 346 347 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00367 Cca-Chr4 3721292 3725407 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00367 K12345 - gmx:100814660 581.637
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00367 04 3721292 3725407 Cca04g00367 04 3721292 3725407 ECH