Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00362 ATGCAAGGTCATCCAGCTGTGAACTTGCCAAGATTACCTGCTGGGCTCACCTTACCTCCTCCCATACCTGTTGAGGATGCAAGTAAAAGAAGAAAAGGTGATACCAAAGATCATTCCTTAAGTCAATGGTTTACAAATTTCTCGGAAGCAGATGAGCTCTTACAGCTTGCAGCAGCTCGTCAGCAGGTTCAAGCTCATATTGCTAAACTCAGACGACAGATAAGCTTGATAGATGGACAGCATCAGCAGTTTAAATCTACTTCTGAGCAGTAG 273 0.4396 MQGHPAVNLPRLPAGLTLPPPIPVEDASKRRKGDTKDHSLSQWFTNFSEADELLQLAAARQQVQAHIAKLRRQISLIDGQHQQFKSTSEQ 90
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00362 90 Coils Coil 53 73 - -
Cca04g00362 90 PANTHER YEATS DOMAIN 2 88 IPR005033 GO:0006355
Cca04g00362 90 MobiDBLite consensus disorder prediction 1 38 - -
Cca04g00362 90 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 2 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00362 Cca-Chr4 3616602 3618130 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00362 K11341 - gmx:100790602 165.236