Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00361 ATGACCAACAGCTCATCTTCGAAAAAGCACGGTCAAGATCAGCCTGAATTAAGTGGTCCTACCCCCAAATCCCAGCGAACCAAAATGGGCAAATCCGAAGACAACGATAAGAAGAACTTGGGTAAGAAACTCAAAGATGTAGAAATAAACATTCCAATCGTGTATGGGAACATAGCATTTTGGCTTGGCAAAAAGGCCAGCGAGTATCAGTCACATAAATGGACAGTATATGTCCGTGGAGCATCCAATGAAGATCTTGGGGCGATAATAAAGCGTGCTGTTTTTCAGTTGCATTCTAGTTTCAATAATCCCACCCGTGTTGTGGAGGCGCCACCTTTTGAATTGTCGGAGGCCGGATGGGGGGAATTTGAAGTTGCCATCACACTTTATTTCCACAGTGATGTTTGTGACAAACCTTTGAACTTATATCATCACTTGAAGTTGTATCCAGAGGATGAAAACAGTTCCATGTCCACAAAGAAGCCTGTTGTTGTGGAGTTTTATGATGAAAGTTTTCCCTGA 522 0.4272 MTNSSSSKKHGQDQPELSGPTPKSQRTKMGKSEDNDKKNLGKKLKDVEINIPIVYGNIAFWLGKKASEYQSHKWTVYVRGASNEDLGAIIKRAVFQLHSSFNNPTRVVEAPPFELSEAGWGEFEVAITLYFHSDVCDKPLNLYHHLKLYPEDENSSMSTKKPVVVEFYDESFP 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00361 173 Pfam YEATS family 71 150 IPR005033 GO:0006355
Cca04g00361 173 MobiDBLite consensus disorder prediction 1 26 - -
Cca04g00361 173 CDD YEATS_TFIID14_like 49 170 - -
Cca04g00361 173 ProSiteProfiles YEATS domain profile. 43 173 IPR005033 GO:0006355
Cca04g00361 173 MobiDBLite consensus disorder prediction 1 39 - -
Cca04g00361 173 PANTHER YEATS DOMAIN 15 170 IPR005033 GO:0006355
Cca04g00361 173 Gene3D YEATS domain 44 172 IPR038704 -
Cca04g00361 173 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 14B 15 170 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00361 Cca-Chr4 3615143 3616576 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00361 K11341 - gmx:100790602 330.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00361 04 3615143 3616576 Cca04g00361 04 3615143 3616576 ECH