Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00358 ATGAAGGATGGGGAGCTTGATCAATTATATATCAAGAGAAGGGATCAATTGAAAGAGCTTGTTGCTAGCATAATCTCTCCAAAGATTGTACAGGGCAAGACTCTAAATGGGAAGGAGTTTGTCTCCTTCCTGGAGCAGATACTTGAAGCCTTGAACAAGGGAGAGATTCCATCAACAGGCTCTCTTGTGGAGGTTTTCAACAAGAATATTCTTGAAAAGTGTCTGAAGTTGTACAATGAAAAGATGGCAAAACTAGTTCTACCTCTTCCTGAGGAATCTCTGCAAGGGGCCCATGATAAGTCTAGAGATGAAGTCATGCAAGTCTTTGATCAGCAGCATTTTGGTCGTCACCATGCTAAGAAATCAGTTATGCAGCTGGATGAAGAAATACAACAGGTGTATAAGCATGTTGTTTTGAAAAATGAGTATCAATCTTCAAAGCTCTGTGAGGGACTGTACACCAGATGTGAGGACATAATGGATCAGCTTCAAGTTCTCAAACTTCCTTCCTTGGCAAAATTTAATGCAGGTTTCTTGCAATGCAATCGAAGTTTTGAGCGTGAATGTGTTGGACCTTCAAAAACAAATTATGAGCAACGCATGATGAAGATGTTGGGGAAGTCTCGGTCTCTGTTTATAAAGGAGTACAACCACAGGCTCTTCAATTGGTTGGTGGCCTTCTCACTGGTTATGGTAGTGATTGGCCGCTTTTTTATAAAATTCATTTTGATTGAAATTGGAGCATGGGCACTCTTTATATTTCTGGAGACATACACAAGAATGTTTTGGTCGGCAGAGGCACTTTACTATAACCCAGTTTGGCATTTTATAGTTGCAACTTGGGAAACTGTTGTTTACAGTCCAGTCCTGGATCTTGACAGATGGGCTATTCCCCTCGGTGTAATTCTGTCATTGTTTGTTCTATATTGGCGGTGTTATGGGAGAAAGAAATATGGATCGCAGTGGCTATTACCTTTATACAGAAGCAATAAAAATGAGCTCGCCGGCCCCTTCATCTTCAAAAAAGGCTCTTCTTCTTCTTCAGAGTGTAAAAAGGTGGTGAACAGAGGTGCCACCTCAAGTTGTTCCCTGCTATCCGTCGTCGCAACCGCCACTTCCGTCGCCGGAATCCTCCGCACTCTCTTCGCCGCCGGAGAATATTTGATTGGCAATCCTATACTTATTAGTCAAGTTTTAGAATACAGAGAAGCTTCAATGGCCAAGAAACCAAGACAAAGATCCAGTAAATTATCTGTGTACCTTTACATTCCTAATATAATTGGATACATCCGGGTTCTCTTAAACTGTTTTGCCTTCTCCCAATGTTTAACAAACAAAATCTTATTCTCCTTTCTCTATTTTTTAAGCTTTGTATGTGATGCTGTTGATGGCTGGTGTGCCCGCAAATTCAATCAAGTGTCAACCTTTGGAGCTGTACTGGACATGGTAACAGACAGAATTAGCACTGCTTGTCTACTTGTTGTTCTTTCCCAACTATACAAGCCTGGCCTTATCTTCTTGTCATTGCTTGCTTTAGATATTGCCAGCCACTGGCTGCAAATGTACAGCACTTTCTTGACGGGCAAGGCTAGTCATAAAGATGTAAAAGACAGCAGCAGCTGGCTTTTCAGGGCATACTATGGAAATAGGATGTTTATGGCTTACTGTTGTGTTTCATGTGAGGTTCTTTACCTAATCCTGTTTTATCTTTCGGAGAATCAATCAGAGAAATTGCTGGATGTTATATCAAGTAATTTGCAAAAGATATCATTTCTCTCTCTCCTAATGGGTACTAGTATATTTGGATGGGCAGTCAAGCAAATTATAAATTTTATTCAGATGAAGACGGCAGCAGATGTGTGTGTGCTTTATGACATCGACAAAAAACATAACCACTGA 1899 0.4071 MKDGELDQLYIKRRDQLKELVASIISPKIVQGKTLNGKEFVSFLEQILEALNKGEIPSTGSLVEVFNKNILEKCLKLYNEKMAKLVLPLPEESLQGAHDKSRDEVMQVFDQQHFGRHHAKKSVMQLDEEIQQVYKHVVLKNEYQSSKLCEGLYTRCEDIMDQLQVLKLPSLAKFNAGFLQCNRSFERECVGPSKTNYEQRMMKMLGKSRSLFIKEYNHRLFNWLVAFSLVMVVIGRFFIKFILIEIGAWALFIFLETYTRMFWSAEALYYNPVWHFIVATWETVVYSPVLDLDRWAIPLGVILSLFVLYWRCYGRKKYGSQWLLPLYRSNKNELAGPFIFKKGSSSSSECKKVVNRGATSSCSLLSVVATATSVAGILRTLFAAGEYLIGNPILISQVLEYREASMAKKPRQRSSKLSVYLYIPNIIGYIRVLLNCFAFSQCLTNKILFSFLYFLSFVCDAVDGWCARKFNQVSTFGAVLDMVTDRISTACLLVVLSQLYKPGLIFLSLLALDIASHWLQMYSTFLTGKASHKDVKDSSSWLFRAYYGNRMFMAYCCVSCEVLYLILFYLSENQSEKLLDVISSNLQKISFLSLLMGTSIFGWAVKQIINFIQMKTAADVCVLYDIDKKHNH 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00358 632 PANTHER GUANYLATE BINDING PROTEIN 1 332 - -
Cca04g00358 632 Pfam CDP-alcohol phosphatidyltransferase 422 515 IPR000462 GO:0008654|GO:0016020|GO:0016780
Cca04g00358 632 SUPERFAMILY Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain 31 251 IPR036543 GO:0003924|GO:0005525
Cca04g00358 632 Gene3D - 32 165 - -
Cca04g00358 632 Gene3D - 405 574 IPR043130 -
Cca04g00358 632 Pfam Guanylate-binding protein, C-terminal domain 32 155 IPR003191 GO:0003924|GO:0005525
Cca04g00358 632 ProSitePatterns CDP-alcohol phosphatidyltransferases signature. 463 485 IPR000462 GO:0008654|GO:0016020|GO:0016780
Cca04g00358 632 PANTHER GUANYLATE-BINDING PROTEIN 4-LIKE 1 332 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00358 Cca-Chr4 3494347 3506336 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00358 406 630 Lipid Metabolism Gene Families AT1G68000 74.667 6.48e-123 361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00358 - - gmx:100787000 623.624