Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00334 ATGGCTTCGGATAAGGTGGTGGAAACGGTAATAGCAGGCAACTACGTGGAAATGGAAACCGAAGGCAAGCCCAAGGACGTAAAATCAAAGTTATCAAACTTGTTGTGGCATGGTGGTTCTGCTTATGATGCTTGGTTTAGCTGTGCCTCCAACCAGGTGGCACAGGTGCTGCTTACGTTGCCATACTCATTTTCCCAGCTGGGAATGCTTTCTGGCATACTTTTTCAACTCTTCTATGGTTTACTTGGAAGCTGGACGGCTTACCTCATTAGCATACTCTACGTTGAATACAGAACAAGAAAAGAAAGAGAAAAAGTTAACTTCAGGAACCATGTCATCCAGTGGTTTGAGGTTCTTGACGGGCTCCTCGGGAAACACTGGAGAAACGTGGGTTTGGCCTTTAACTGCACATTTCTTCTGTTTGGATCTGTTATACAGCTGATAGCTTGTGCAAGCAACATATATTACATAAATGACAACCTGGACAAGAGGACTTGGACTTACATCTTCGGAGCTTGCTGTGCCACCACTGTCTTTATTCCTTCCTTTCACAATTACAGAATCTGGTCCTTTTTGGGCCTCCTCATGACCACTTACACTGCATGGTACCTCACTGTTGCCTCTCTCCTTCACGGCCAGGTGGAGGGAGTTAAGCATTCGGGTCCTACCAAATTGGTTCTATATTTTACGGGGGCCACAAACATTCTCTACACATTCGGGGGACATGCTGTTACTGTGGAGATAATGCACGCGATGTGGAAGCCTCAGAAGTTCAAGGCCATATACTTACTGGCTACACTGTATGTGCTGACACTGACACTTCCATCGGCAGCAGCAGTGTATTGGGCGTTTGGAGACATGCTTCTAAATCACTCCAATGCCTTTGCTCTCCTCCCAAAATCACCCTTCCGAGACATGGCTGTCATTTTAATGCTCATACACCAGTTTATAACATTCGGGTTTGCATGCACCCCATTATACTTCGTGTGGGAGAAAGCAGTAGGGATGCACGAGTGCAAGAGCCTGTGCAAGCGTGCATTGGTGAGATTGCCGGTGGTGATTCCTATATGGTTCTTGGCCATCATATTCCCCTTCTTTGGTCCCATCAACTCCACCGTTGGCTCTCTCCTTGTCAGCTTCACCGTTTACATCATCCCCGCCCTCGCTCACATCTTCACCTTCAAATCATCCTCTGCACGACAGAATGCTGTGGAACAACCTCCCAAGTTTGTTGGAAGATGGGTGGGAACATTCATTATCAACGCATTTGTGGTGGTGTGGGTCCTAATCGTAGGGTTTGGATTTGGAGGGTGGGCCAGCATGGTGAACTTCATACACCAGATTGACACATTTGGACTCTTCACCAAGTGTTATCAGTGCCCTCCACCGATTCTACCACCTGTGCCGCCGCAACACCTGAACGCCACCGCGCCTTCGCCTCTTCACCACCCTCGTCATGCCCACTAA 1467 0.4799 MASDKVVETVIAGNYVEMETEGKPKDVKSKLSNLLWHGGSAYDAWFSCASNQVAQVLLTLPYSFSQLGMLSGILFQLFYGLLGSWTAYLISILYVEYRTRKEREKVNFRNHVIQWFEVLDGLLGKHWRNVGLAFNCTFLLFGSVIQLIACASNIYYINDNLDKRTWTYIFGACCATTVFIPSFHNYRIWSFLGLLMTTYTAWYLTVASLLHGQVEGVKHSGPTKLVLYFTGATNILYTFGGHAVTVEIMHAMWKPQKFKAIYLLATLYVLTLTLPSAAAVYWAFGDMLLNHSNAFALLPKSPFRDMAVILMLIHQFITFGFACTPLYFVWEKAVGMHECKSLCKRALVRLPVVIPIWFLAIIFPFFGPINSTVGSLLVSFTVYIIPALAHIFTFKSSSARQNAVEQPPKFVGRWVGTFIINAFVVVWVLIVGFGFGGWASMVNFIHQIDTFGLFTKCYQCPPPILPPVPPQHLNATAPSPLHHPRHAH 488
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00334 488 PANTHER AUXIN TRANSPORTER-LIKE PROTEIN 2 3 468 - -
Cca04g00334 488 Pfam Transmembrane amino acid transporter protein 37 430 IPR013057 -
Cca04g00334 488 PANTHER OS05G0424000 PROTEIN-RELATED 3 468 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00334 Cca-Chr4 3241515 3245655 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00334 4 460 Organic Solute Cotransporters AT2G21050 90.372 0.0 877
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00334 K13946 - gmx:100812002 975.696