Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00326 ATGGGGGTTTCGGAGAATTGCAAAGGGTTAATACTTGCCATGGGTTCCAGTGTATTCATTGGCTCAAGCTTCATCTTGAAGAAGAAGGGTCTCAAGCGTGCTGCTGCACGCGGTACTCGTGCAGGAGTTGGAGGTTATACTTATCTACTAGAGCCGCTTTGGTGGGCTGGCATGGTTACAATGATTATTGGGGAGGTTGCAAATTTTGTGGCTTATATCTATGCTCCGGCGGTTCTCGTAACTCCCCTTGGTGCGCTTAGTATTATTGTCAGTGCTATTTTGTCTCACTTCTTGTTGAACGAGCGGCTTCCAAAGATGGGGGTGTTGGGGTGTGTATCATGCATTGTGGGATCGGTTGTTATTGTCATTCATGCACCACAAGAGCAGACTCCGGATTCTGTCCAAGAAATATGGGATCTGGCTACTCAACCAGCATTTCTGACATATGTGGTGGCAACAGTTTCGGTTGTTTTGGCCTTGATCATACACTTTGAACCTCGCTATGGACAGACTAATATGTTGGTCTACTTGGGAATTTGTTCATTAGTTGGTTCACTCACGGTGGTGAGCATAAAGGCCATTGGAATTGCAATAAAGCTTACACTTGATGGAATAAGTCAAGTAGCTTATCCTCAGACTTGGTTTTTTCTTACGGTGGCTACAATCTGTGTCATTACACAGTTGAATTACCTTAATAGGGTGAGTGAATGGTGA 714 0.4468 MGVSENCKGLILAMGSSVFIGSSFILKKKGLKRAAARGTRAGVGGYTYLLEPLWWAGMVTMIIGEVANFVAYIYAPAVLVTPLGALSIIVSAILSHFLLNERLPKMGVLGCVSCIVGSVVIVIHAPQEQTPDSVQEIWDLATQPAFLTYVVATVSVVLALIIHFEPRYGQTNMLVYLGICSLVGSLTVVSIKAIGIAIKLTLDGISQVAYPQTWFFLTVATICVITQLNYLNRVSEW 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00326 237 Pfam Magnesium transporter NIPA 6 235 IPR008521 GO:0015095|GO:0015693|GO:0016021
Cca04g00326 237 PANTHER UNCHARACTERIZED 2 234 IPR008521 GO:0015095|GO:0015693|GO:0016021
Cca04g00326 237 PANTHER MAGNESIUM TRANSPORTER NIPA6-RELATED 2 234 - -
Cca04g00326 237 SUPERFAMILY Multidrug resistance efflux transporter EmrE 52 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00326 Cca-Chr4 3172875 3176602 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00326 K22733 - gmx:100817349 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00326 04 3172875 3176602 Cca04g00326 04 3172875 3176602 ECH