Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00324 ATGGCAGCAGAGTCAAACGCTGGATTTCACAATGAAGATATGGATTCTGTTTTCAATAGGCATGCAATATCGTTTCAGCCTGGTGCTATTAACCGCATGTCAGAGATGGTTCCAATGGGTAATTATTTTGGGTTAAGTAGTTCCTCTGGGATGATATATTCTGGGAATTCAAACATCATTAACAGTAATCCTGTCATGAGTCAAGCTGGTAATTCTTCCGGTTCTTCGCTCCTTCTTGACTCGGTCCCAGGGCTGAAACATGACACAGGGTTGGCTGTTGAGTGGTCTGTTGATGAACAGTACAGGTTGGAGGAGGGTCTTTCAAAATATGCTAATGAGCCTAGTATCATGAGGTATATCAAAATTGCTGCACTGTTGCCTGATAAAACGGTTCGTGATGTTGCTTTGAGGTGTAGATGGTTGACAAGAAAGCGAAGGAAATCAGAAGAACACAATCTGGGAAAGAAGGTCAATAACAGAAAGGATAAGCCAGTGGAGTCAGCATCAAAGATGCATTTACATTCAGCTCTGCCCCCAAGCATGGCTACATATTCTCGCATGTCACATCATATGAACCAAAGTCAACGGATACAATATGATGGATTTTGTAGTCGTTTGAAGCAACTCATGGAGCAGAATGCTCAAGCTTTTAATCAAATCACTGCCAATTTGTCTACTTACAAGTTGCAGGATAACATCGACCTCTTTTGCCACACAAGGCACAATATTAATACCATTCTTAACGATATGAGAGAGATGCCTGGCATTATGATCCGAATGCCGCCACTGCCTAACATAGTGGGCAAAGTGTAG 813 0.4219 MAAESNAGFHNEDMDSVFNRHAISFQPGAINRMSEMVPMGNYFGLSSSSGMIYSGNSNIINSNPVMSQAGNSSGSSLLLDSVPGLKHDTGLAVEWSVDEQYRLEEGLSKYANEPSIMRYIKIAALLPDKTVRDVALRCRWLTRKRRKSEEHNLGKKVNNRKDKPVESASKMHLHSALPPSMATYSRMSHHMNQSQRIQYDGFCSRLKQLMEQNAQAFNQITANLSTYKLQDNIDLFCHTRHNINTILNDMREMPGIMIRMPPLPNIVGKV 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00324 270 MobiDBLite consensus disorder prediction 147 172 - -
Cca04g00324 270 Pfam Protein of unknown function (DUF3755) 226 257 IPR022228 -
Cca04g00324 270 CDD SANT 94 139 IPR001005 -
Cca04g00324 270 Gene3D - 91 153 - -
Cca04g00324 270 PANTHER FINGER CCCH DOMAIN PROTEIN, PUTATIVE (DUF3755)-RELATED 1 265 - -
Cca04g00324 270 SUPERFAMILY Homeodomain-like 83 150 IPR009057 -
Cca04g00324 270 MobiDBLite consensus disorder prediction 147 169 - -
Cca04g00324 270 PANTHER TRANSCRIPTION FACTOR SUPERFAMILY PROTEIN, PUTATIVE-RELATED 1 265 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00324 Cca-Chr4 3129322 3136561 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00324 - - gmx:100807371 454.136