Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00323 ATGATAGATTCAAACCCTCCACTCATGCAACACTATGGTGCACTTGTGAGAAACTCTTGTGAAGCCAAACAGCCTAAGAGTTTTCATGATCAAAAACATGATCCTCCAGTGGATGCATGTGACCTACCCTTGATAGACCTTAGTGGTCTCAAAAGCTATGATGAAAGAGAGAGGCTGGCTTGCATTGCAGCAATATGCAAGGCATCATCAGAATGGGGATTTTTCCAAGTTGTGAACCATGGGATAAGCCATGAGTTGCTAAAGAAAATGAGGGAAGAACAAGTGAAGTTGTTTGAAGTACCCTTTGAGAAGAAAATCACTTGTGGGCTTCTAAATGACCCATATAGGTGGGGGACACCAACAGCTACTCGTTCAAATCAATTCTCTTGGTCTGAAGCTTTCCACATTCCTCTCACCATGATCTCGGAATCTGCTTCCTGGGGTGAATTCAGTTCTTTGAGGGAAGCAATAAATGAGTTTGCAGAAGCGATGCTAGAAGTATCTAGGTTGTTGGCCAGCATTCTAGCACAAAACCTGGGTTACCCTAAGGATGCAGTTGAAAAACTTTGTGATGCTGGCACATGCTTTCTGCGACTGAATCACTATCCATGCTGTCCAAAATCTAAAGAAGAAATTTTTGGATTAGTGCCTCACACTGACAGTGATTTCCTTACTATCCTTTGTCAAGATCAGGTCGGTGGACTCCAACTCATGAAAGATTCCAAATGGGTCGCTGTAAAACCAAATCCAGATGCTCTAATTGTCAACATTGGGGACCTTTTCCAGGCTTGGAGTAATAATGAGTACAAAAGCGTGGAGCACAAGGTTGTGGCAAATGATAAAATGGAAAGATACTCCATAGCATACTTCCTATGCCCATCTTACAGTACTGTCATAAACAGCTGCAAAGGACATTCTGTATATAGGAAGTTCACGTTTGGAGAATACAGACACCAAATTCAGGAAGATGTCAAGAAAATAGGACGCAAAATAGGACTATCAAGATTTTTAATTTAA 1017 0.4149 MIDSNPPLMQHYGALVRNSCEAKQPKSFHDQKHDPPVDACDLPLIDLSGLKSYDERERLACIAAICKASSEWGFFQVVNHGISHELLKKMREEQVKLFEVPFEKKITCGLLNDPYRWGTPTATRSNQFSWSEAFHIPLTMISESASWGEFSSLREAINEFAEAMLEVSRLLASILAQNLGYPKDAVEKLCDAGTCFLRLNHYPCCPKSKEEIFGLVPHTDSDFLTILCQDQVGGLQLMKDSKWVAVKPNPDALIVNIGDLFQAWSNNEYKSVEHKVVANDKMERYSIAYFLCPSYSTVINSCKGHSVYRKFTFGEYRHQIQEDVKKIGRKIGLSRFLI 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00323 338 Pfam non-haem dioxygenase in morphine synthesis N-terminal 42 136 IPR026992 -
Cca04g00323 338 Gene3D - 11 326 IPR027443 -
Cca04g00323 338 SUPERFAMILY Clavaminate synthase-like 24 321 - -
Cca04g00323 338 PANTHER OS02G0630300 PROTEIN 26 330 - -
Cca04g00323 338 Pfam 2OG-Fe(II) oxygenase superfamily 196 293 IPR044861 -
Cca04g00323 338 PANTHER 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN-RELATED 26 330 - -
Cca04g00323 338 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 191 293 IPR005123 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00323 Cca-Chr4 3121736 3125061 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00323 25 316 Glycosyltransferase AT5G59530 30.154 1.91e-36 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00323 - - gmx:100809329 629.017