Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00318 ATGAGCGAGCGGAAGAGATTGAAGTTTGAATCGAGACGCAAagcgagaagagaaatggagaagagagagagagagGAAATTGAAGGTTGGATCGGAGGAGAGGAGAGTGCAGGGGAGATGCTAAGTAGGGTTAGCAGCGTGCGTCCTTTCTTGTTCCCTCCGCCGCTGCACAGGGTTCCTCTCCGCGTCGGCAACGTCCTCGAGCTCGTCGGCCCCTCACCTTCCGCCAAGACGCACATTCTCATCCACGCCGCAATCACCGCCCTTCTCCCCAAACACTACGGCGGCCTCGACCACTTCGTCCTCTTTCTCGACCTCGATTGCCGCTTCGATATCGCGCGCTTCTCGCAGTTGCTCCTTCATCGCATCACGGAAGACGGAACACGACATTGTGATCAAACGCTGTACGATCTATGCATGGCTCGCTTCTTGTACGCCCGTTGTTACGACACCTTTCAATTTCTTCACACTCTCAGGACATTGCATTGTCGCTTAGAGAAGGAGAAACAAGTTCATGGAGTTGGTGTTCACCTCCTCTTGATTGACAGCATTGGAGCTTTTCATTGGATGGATCGTGCATCAATGTTCTTGTCTCAAAGAGAAAACAACAAGAAAAAACTTTTCCTTCAGACCGTGTCTGAAGCCGTAGTTCAGAATATTAGAAAACTTCTTCAGGTGCACCCTATGCTTGTTATAGCTACAAAGTCAGTGATTTTTGGGAACAAATATTCTACGTCTTCAAATGAGCTCAAAGGGAATATGGAAGAACGATGTTCAAGAAACGTGACAAGAAACCATCAAACTTTTCAGTATCGGGAATACATGCCATCTGTTTGGCAGTCCTTTGTTACACACAGAATACTTGTACGTTCTTCAGATGATCATCCAGTTGCAACCAATTATCAAAACTCCTCATTCTATTTGTTGGAATGGTTATTGCCAAGATTGAATTTTGCTGATAAGATTGTAGTGAAAGATGCTGGTGTCTTTCTGGACTCGTGA 1002 0.4501 MSERKRLKFESRRKARREMEKREREEIEGWIGGEESAGEMLSRVSSVRPFLFPPPLHRVPLRVGNVLELVGPSPSAKTHILIHAAITALLPKHYGGLDHFVLFLDLDCRFDIARFSQLLLHRITEDGTRHCDQTLYDLCMARFLYARCYDTFQFLHTLRTLHCRLEKEKQVHGVGVHLLLIDSIGAFHWMDRASMFLSQRENNKKKLFLQTVSEAVVQNIRKLLQVHPMLVIATKSVIFGNKYSTSSNELKGNMEERCSRNVTRNHQTFQYREYMPSVWQSFVTHRILVRSSDDHPVATNYQNSSFYLLEWLLPRLNFADKIVVKDAGVFLDS 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00318 333 ProSiteProfiles RecA family profile 1. 41 237 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Cca04g00318 333 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 61 204 IPR027417 -
Cca04g00318 333 Pfam Rad51 62 240 IPR013632 -
Cca04g00318 333 Gene3D - 58 307 IPR027417 -
Cca04g00318 333 MobiDBLite consensus disorder prediction 1 26 - -
Cca04g00318 333 PANTHER DNA REPAIR PROTEIN XRCC2 28 331 IPR030547 GO:0000724|GO:0005657|GO:0006281|GO:0033063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00318 K10879 - gmx:100807727 547.74