Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00300 ATGGCAAATGCAGGAAATTTGATATCACCAAGAAGCTTCAATCCAATATTCAATCCATGCCACCCTGCTACTAAGCTCAAAACCTTCAGGTTGCTCTCTCGGATTCACTCTTACAATAATGCCACTGTTACTGCTTCTACCAAAAGAAAGGATAACTTGCACTCTCCATTGATTGGGAAGAATACGAGCAGGGCTTCTCGCCGTCTGATCACAATATCACCAGGTGATGGCAGATATCATGGGGATTGGACAAGTGAGTATCTCGTCTCTTTGCATGACCTACAGTTACAGGATTTGATTGAAGAAGATAACCCACATAAGAATGCCCAAGTTTTCATTAACCTCTCCGTCCAAAAGCATGCTAGCTTTGGTTTATCCGTGGATGGAAGAGTTACGACATCCTTCACTAGAAAATGTAGCAACTGTTCTACTCCGTATTGCCGACAGATTGATGCCAAATTTAACGTATGGGTTCTTATAGCACCTAGAGATAACCGCAAGGTACAACTACCTGAAATCGGAGGAGATCCTTATGTAATATATGTTAGACCGGGATACGAAGTTGATCTTGATTCTCTTGTACAAGATGCTATCCGGCTAAGCTCCTCAGTAAAAGACACTTGCTCGGAATTGTGTGAGAAATCTGAGGGTACAATACAATATATAACTGGACAAAGCAAGGCTTCTGTTGATAAAAGGTGGTCTAGACTACTGGAACTAAAGAAGACAACTTTATGA 738 0.4146 MANAGNLISPRSFNPIFNPCHPATKLKTFRLLSRIHSYNNATVTASTKRKDNLHSPLIGKNTSRASRRLITISPGDGRYHGDWTSEYLVSLHDLQLQDLIEEDNPHKNAQVFINLSVQKHASFGLSVDGRVTTSFTRKCSNCSTPYCRQIDAKFNVWVLIAPRDNRKVQLPEIGGDPYVIYVRPGYEVDLDSLVQDAIRLSSSVKDTCSELCEKSEGTIQYITGQSKASVDKRWSRLLELKKTTL 245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00300 245 Pfam Large ribosomal RNA subunit accumulation protein YceD 127 241 IPR003772 -
Cca04g00300 245 PANTHER LARGE RIBOSOMAL RNA SUBUNIT ACCUMULATION PROTEIN YCED HOMOLOG 2, CHLOROPLASTIC 1 244 IPR044985 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00300 - - gmx:100788798 414.075