Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00299 ATGAAGTTCTCCTTATGGACGGTGTTCGTCTTAGCAACAGTATCTGTTCTTCCCTCTTCATGCTCCCAATCCCAATGGCAGATCCTCACCAAACACAATTTCTCTTCTCAGATCCGTctccatcctcacctcctcctcctcgtcacgcttccctGGTCCGGCGAGTCTCGATCGCTCATGAACGACGTCTCGCTCGCCGTCTCCGCCGCGCCGCGGGAGTTCGCCTCGCTGAAACTCACGCTCATGCACAGGAACGTCGAGAGGGTTCTGGCGGATTCCGTAGGCGCTACCGATGAAACTACGATCGTTTATTTCCACTATTCGGTGTCGTACAGGTACCGAGGGAGACTCCGAGCTCGGAATATTCTGTCGTCGTTGTATCCTTATATGTCGCTTGCGCCCGAGGAGGTTCCGCTTAAAGCGCTCAACACTCCTCTGGATTTCAGATTGTTCGTTGATTCCACGGACAGAGCTATTGTTCTCGTTGACCTTTGTGGATGGACGCCCAAGCTGCTCGCCACAAGTACTAAAGATAACGGAACGCAGAATGGTTTCAGCGTGCTCGGGAATCACCATGGAATGGGTTTTACCAGAGGGAATAATAGAATGCATGTGTCAAGGGGGAAGACTAACAAGAAGGTGGCTGAGGAGGACATGTGCAAGGCTGAACTTGGCGTTGATAAAGGGTTTTGTGAAGCTCCTTGGCTGGGGGAGCTTACCTCATTAAATTATGATCCTTTGGAGGGTGCCAAGGATAGGAATAATCATGTTCTACATTCTTGTTCCTCTGAAGAATTTGAGCGGTTTCATTCTTTTTACTTGAAATTCATGACTACTGTGAGAGAATTCTTTTTGCCTCCAGAGCGGAATAGATTTGGCTTGGTTTCAAATAGGTCGATGCTTTCAACCCTAGGTGTTGATGATTATGGCCCGTGGTTTGCAGTTGACTACCTTGCTGGATGTTCAAGTTGTTCAAATATTCTTAAAGAAGAAGATGACTTGAACTATGTTTTGCAGATGAATAATTATTTTGTCAAAGAGCTTGAAGGTAATGGACATGATCAAGAGCCCATTCTACCGGCAAATAAGCCATCTGTACTTCTATTTGTTGATAGATCATCTGACTCCTCAGCAACTAGGGCAAAAAGTAAGGAAGCTCTTCAAGTTTTTAGAGTACTGGCCCAACACTATCATCACGTGAATCAAACAGGTAAGAAGAATAATGATAGTCATGAGAAATTTTCTGTTCGAGATTATCATGGCTTCAAGAGTACATCTGAACATCCTAGGTTAAAGTTGTCTACAACAGCTCAGAAAATTAAATTAAAGGAGAAGATTTCTTCCATCATGATTATAAATGAGGGTAAGCAAGTTAGTTTAGACAATGTACCTTCTGATCTTCAAGGGAGTTCTTTGAACGAGATATTGGCTTATGTTCTCCAGCAAAACAAGGATAGAAAACTAAGCTCCCTGGCAAAGGATTTAGGCTTCCAGCTTTTGTCTGATGATATTGATGTCAGGTTAGGTAATACACAGCAATCACATTCAGAAGTTCAGTCAAATCAAATTTCAACAGAAACTTCTCAACCAGGCAATACAGATACTGTGATGCTGAATGGAGATACACCTAGATCTGCAGGAGAGCTTGAGGAAAATCTCAACTTAAATGAGCTCTCTTCTCAGCATGATGAAGTGAAGAGACCTTCTATTGTCACACATGAAGAGATAGAGTCTTTTCAATCTGAAGAATCTGTTGCAGATCATGAACTTACTGCCACCAAATTTATGATTCCAGAAACAGTTGATTCTTCAGGTGGAAATGAGTATGGAGGAGAACAGAGTCAATTTCTTGGTTTTAATGGTTCTTTTTTCTATTCTGATGGTAATTATCAATTACTTGAAAGACTCACTGGTGGTTGTGAAATTCCATCTTTGGTTATAGTTGATCCTTTTCAGCAGCAACATTATGTTTACCCTGTAGAGAAAAGTTTCAACTTTTCTTCACTGTATGATTTTCTTTCTGAGTTTCTTAATGGAACCCTACTTCCATATCAGCGGTCGGAACATGTTCTTCAAGGCCAAAGGGAGAACATCCATCCTCCATTTGTTAATTTGGATTTTCATGAGGTGGATTCTATACCTCGAATCACGGCTCATACTTTCTCTGATCTTGTTATTGGTTTTAACCTTTCTAACAAAGAAAATACTTCTAATGCATGGAATAGAGATGTCCTGGTCTTGTTTAGCAATAGCTGGTGTTCATTCTGCCAGAGAATGGAAATGGTTGTTCATGAAGTATATCGGGCCATCAAGGGCTATGTGGATATGTTAAACAGGGGATCTCAGAATATGAAAGAAAATTTGGATCATGTCACAATGAAGCTTCCGATAATCTACTTGTTGGATTGTACATTGAATGACTGTGATTTGATACTGAAGTCAGTAGATCAGAGCGAAGTTTATCCTGCTCTGATTTTATTTCCAGCAGAAAAGAAGAAACCTGTTCTTTATGAAGGAGATATGGCTGTAATTGATGTTATGAAATTTGTAGCTGAGCGCGGAAGTAACTTTCATCATCTTATAAGAGACAAAGTGGCAGTTCTGTGGCTATCTGAAAGAGCAGTCAAGAATCAGAATTCGTATGATACTTTGCAACCTGATATCCACGAGGAATCACTTCATATGCTCAACAAATATCATGGTGCCCCGGGTGAAGACAGAATGCTAGACCAGGTGTTCAGATCTAACCTGATGAATTCACCTGTATCAAACGGACTACATGAAGCACTGCCTCATGTGGCGATTGGTTCAGTGCTAATTGCCACAGAAAAGCTTTTGGGGGTTCAGCCATTTGATGGATCAAAGATTGTCATTGTTGCAGCCAATCAAGTAACTGGATTTCAGGGTCTTATCCTCAACAAACATATAGAATGGAGTTTTCTGCCTAATTTGGAAAAAGACTTGGAAAAATTGAAAGAGGCTCCTCTGTCCCTTGGGGGTCCAGTAATGAAAACTGGAATGCCTCTTTTATCCTTAACTAGAACTGTTTCCGGAAATGATTTACCTGAAGTCCTGCCTGGAATTTACTTCCTTGATCATGTGATGACAATTCGTAAAATTGAGGAGCTGAAGTCAGCAAATGAACCAGTCGTGGATTACTGGTTTTTCTTGGGGTATTCAAGCTGGGGATGGAACCAGTTACATGATGAGATGATGGAAGGAGCTTGGAACTTGAGTGAGGATGCAACCAGACATTTGAATTGGCCGTGA 3270 0.4104 MKFSLWTVFVLATVSVLPSSCSQSQWQILTKHNFSSQIRLHPHLLLLVTLPWSGESRSLMNDVSLAVSAAPREFASLKLTLMHRNVERVLADSVGATDETTIVYFHYSVSYRYRGRLRARNILSSLYPYMSLAPEEVPLKALNTPLDFRLFVDSTDRAIVLVDLCGWTPKLLATSTKDNGTQNGFSVLGNHHGMGFTRGNNRMHVSRGKTNKKVAEEDMCKAELGVDKGFCEAPWLGELTSLNYDPLEGAKDRNNHVLHSCSSEEFERFHSFYLKFMTTVREFFLPPERNRFGLVSNRSMLSTLGVDDYGPWFAVDYLAGCSSCSNILKEEDDLNYVLQMNNYFVKELEGNGHDQEPILPANKPSVLLFVDRSSDSSATRAKSKEALQVFRVLAQHYHHVNQTGKKNNDSHEKFSVRDYHGFKSTSEHPRLKLSTTAQKIKLKEKISSIMIINEGKQVSLDNVPSDLQGSSLNEILAYVLQQNKDRKLSSLAKDLGFQLLSDDIDVRLGNTQQSHSEVQSNQISTETSQPGNTDTVMLNGDTPRSAGELEENLNLNELSSQHDEVKRPSIVTHEEIESFQSEESVADHELTATKFMIPETVDSSGGNEYGGEQSQFLGFNGSFFYSDGNYQLLERLTGGCEIPSLVIVDPFQQQHYVYPVEKSFNFSSLYDFLSEFLNGTLLPYQRSEHVLQGQRENIHPPFVNLDFHEVDSIPRITAHTFSDLVIGFNLSNKENTSNAWNRDVLVLFSNSWCSFCQRMEMVVHEVYRAIKGYVDMLNRGSQNMKENLDHVTMKLPIIYLLDCTLNDCDLILKSVDQSEVYPALILFPAEKKKPVLYEGDMAVIDVMKFVAERGSNFHHLIRDKVAVLWLSERAVKNQNSYDTLQPDIHEESLHMLNKYHGAPGEDRMLDQVFRSNLMNSPVSNGLHEALPHVAIGSVLIATEKLLGVQPFDGSKIVIVAANQVTGFQGLILNKHIEWSFLPNLEKDLEKLKEAPLSLGGPVMKTGMPLLSLTRTVSGNDLPEVLPGIYFLDHVMTIRKIEELKSANEPVVDYWFFLGYSSWGWNQLHDEMMEGAWNLSEDATRHLNWP 1089
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00299 1089 Pfam Uncharacterized ACR, COG1678 951 1081 IPR003774 -
Cca04g00299 1089 PANTHER TRANSPORTER, PUTATIVE (DUF179)-RELATED 30 1089 - -
Cca04g00299 1089 MobiDBLite consensus disorder prediction 511 535 - -
Cca04g00299 1089 Gene3D - 933 1087 - -
Cca04g00299 1089 SUPERFAMILY VC0467-like 932 1080 - -
Cca04g00299 1089 Gene3D Glutaredoxin 611 687 - -
Cca04g00299 1089 PANTHER TRANSPORTER, PUTATIVE-RELATED 30 1089 - -
Cca04g00299 1089 Gene3D Glutaredoxin 717 862 - -
Cca04g00299 1089 SUPERFAMILY Thioredoxin-like 723 854 IPR036249 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00299 - - gmx:100814325 1841.24