Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00292 ATGGCAACAACATCATTTTCTGGCTTGCAAATTGCAATGTCAAGATCATGTGTTCCTTCATCACAAAAGATTGCAGATGCAGGCACTGTGGTTCTTGGTGGCAAGTCCAAGCTGGCATCATGGAATAAACTTGCAAGTGCATGTCATGTTGCATCAGTGCAACCTTTCCATCGGGGCTTCGCATCATCATCCATAAGATCTGTCAAAAGTGTCACAAAGGCTATGTCTGATACTAGTGCAGATAGTCCAGTCTCAGGATTGGCCATTGATCTGAAAGGTAAAAGGGCTTTTATTGCTGGTGTTGCTGATGACAATGGATATGGATGGGCAATTGCAAAATCTCTTGCTGCAGCAGGAGCTGAAATTCTTGTTGGCACATGGGTACCTGCTCTGAATATTTTTGAGTCCAGCCTACGACGTGGAAAGTTTGATGGATCACGCATATTACCAGATGGTTCGCTAATGGAGATTACCAAAGTTTATCCATTGGATGCAGTTTTTGACAGTCCTGATGATGTGCCAGAAGATATAAAAACAAACAAGCGCTACGCAGGATCCGCCAAATGGACAGTTCAGGAAGTTGCTGAATCTGTTAAGGAAGACTTTGGCAGCATAGATATCCTTGTGCACTCACTTGCCAATGGACCAGAGGTGACCAAACCATTGTTGGAGACATCTCGGAGTGGATATCTTGCTGCAATATCTGCATCTAGTTACTCCTATGTTTCTTTACTCAAGCATTTTCTTCCAATCTTGAACCCAGGTGGATCTTCAATCTCCCTGACATACATTGCTTCAGAGAGGATCATTCCTGGATATGGTGGTGGTATGAGTTCTGCAAAAGCTGCACTGGAGAGTGATACTCGAGTGCTTGCTTTTGAAGCAGGAAGAAAGCGCAAAATCAGAGTCAATACTATATCTGCTGGTCCACTGAGAAGTCGTGCTGCAAAGGCTATTGGATTCATTGATATGATGATTGATTACTCATCAGCCAATGCACCTCTACAGAAAGAACTATCAGCAGATGAGGTTGGCAGTGCAGCTGCCTTCTTAGCATCACCTTTGGCATCTGCCATCACCGGCACTGTTCTATATGTTGACAATGGTCTGAATGCTATGGGTGTTGGAGTTGACAGTCCAATATTTAAAGATCTTGACATTCCCAAGGACCAGCATTAA 1179 0.4377 MATTSFSGLQIAMSRSCVPSSQKIADAGTVVLGGKSKLASWNKLASACHVASVQPFHRGFASSSIRSVKSVTKAMSDTSADSPVSGLAIDLKGKRAFIAGVADDNGYGWAIAKSLAAAGAEILVGTWVPALNIFESSLRRGKFDGSRILPDGSLMEITKVYPLDAVFDSPDDVPEDIKTNKRYAGSAKWTVQEVAESVKEDFGSIDILVHSLANGPEVTKPLLETSRSGYLAAISASSYSYVSLLKHFLPILNPGGSSISLTYIASERIIPGYGGGMSSAKAALESDTRVLAFEAGRKRKIRVNTISAGPLRSRAAKAIGFIDMMIDYSSANAPLQKELSADEVGSAAAFLASPLASAITGTVLYVDNGLNAMGVGVDSPIFKDLDIPKDQH 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00292 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 92 374 IPR036291 -
Cca04g00292 392 PANTHER ENOYL-ACYL-CARRIER REDUCTASE 1 391 - -
Cca04g00292 392 Gene3D Enoyl acyl carrier protein reductase 321 378 - -
Cca04g00292 392 CDD ENR_SDR 93 374 IPR014358 GO:0004318|GO:0006633
Cca04g00292 392 Pfam Enoyl-(Acyl carrier protein) reductase 190 371 - -
Cca04g00292 392 Gene3D - 94 320 - -
Cca04g00292 392 PRINTS Glucose/ribitol dehydrogenase family signature 203 214 IPR002347 -
Cca04g00292 392 PRINTS Glucose/ribitol dehydrogenase family signature 277 296 IPR002347 -
Cca04g00292 392 PRINTS Glucose/ribitol dehydrogenase family signature 299 316 IPR002347 -
Cca04g00292 392 PRINTS Glucose/ribitol dehydrogenase family signature 334 354 IPR002347 -
Cca04g00292 392 PANTHER ENOYL-[ACYL-CARRIER-PROTEIN] REDUCTASE 1 391 IPR014358 GO:0004318|GO:0006633
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00292 Cca-Chr4 2799895 2805707 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00292 1 386 Acyl Lipid Metabolism Gene Families AT2G05990 74.419 0.0 576
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00292 K00208 - gmx:100785606 707.212