Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00287 ATGAGGAAGAAGAAAAATGGGTTCAGGAAGCCCATTATCATCAAAAAACCGAAGCAACCGCAAGAGCAACCCAGCGTGGATCCCATTACGGGAAAGAAAATCCCCAAAAGTTTCGTTTTTTCGCGAGGCAAAGTGCCCGCTCCTCTCAAACAGCTTCAAATGGACCTCAGGAAGTTGATGCTTCCATATACTGCTCTCAGCCTTAGGGAAAAAAAACGGAATAATCTGAGAGACTTTCTGAATGTTGCTGGACCTATGGGTGTCACGCATTTCCTCATATTGTCAAAAACTGCAACTTCACCTTACTTGAGGGTTGCAACTACCCCTCAAGGGCCTACTCTTACGTTTAAGATACATGAATATGCATTGGCTGCTGACATTGCTCGATCTCAATTGCATCCTCGATGCCCTAAGGATCTGTTTAAAAATTCTGCTTTGATTGTGCTTTCCGGATTCATTAGTGGAGATCTACCATTACGGCTTACAACCAACATGTTCCAGAATATTTTTCCAACAATTGATGTCAAAACTGTAAAGCTCTCCTCTTGCCAAAGAATCTTGCTGCTTAATTACAACAAGGACACTAAGCTCATTGATTTTCGGCATTATTCCATAAGATTACAACCTGTAGGTGTTTCACGCAGAATAAGAAAACTTGTGCAAACCCATCAGGTTCCTGATCTAAAGAATCTTCAAGACGTTAGTGATTTTGTCACAAAGGCTGGCTACGGATCAGAAAGTGAAGCTGATGAAGAAGCAGCAACAGTGACTTTATCTAGTAATATTGGTAGAGTTAATCGTGCTTCTACAAAAAGTGCTGTCAAACTGCAAGAGGTTGGACCTAGGATGACTCTTCAACTAGTTAAAATTGAGAAGGGTCTGTGTTCGGGTGAAGTTCTCTTCAGTGAATATGGAAAAGCTGGTGGCAAAGAAAAAAGTGACGATGAGATGCAAGGTGAAGAAGATGAAGAAGGTAGtgacgatgaagaagatcaagatggagaacatcaagaggatagtgaagacgaagaTCAAGAACTTGATTAG 1047 0.3926 MRKKKNGFRKPIIIKKPKQPQEQPSVDPITGKKIPKSFVFSRGKVPAPLKQLQMDLRKLMLPYTALSLREKKRNNLRDFLNVAGPMGVTHFLILSKTATSPYLRVATTPQGPTLTFKIHEYALAADIARSQLHPRCPKDLFKNSALIVLSGFISGDLPLRLTTNMFQNIFPTIDVKTVKLSSCQRILLLNYNKDTKLIDFRHYSIRLQPVGVSRRIRKLVQTHQVPDLKNLQDVSDFVTKAGYGSESEADEEAATVTLSSNIGRVNRASTKSAVKLQEVGPRMTLQLVKIEKGLCSGEVLFSEYGKAGGKEKSDDEMQGEEDEEGSDDEEDQDGEHQEDSEDEDQELD 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00287 348 Pfam Brix domain 45 289 IPR007109 GO:0006364|GO:0019843
Cca04g00287 348 MobiDBLite consensus disorder prediction 1 30 - -
Cca04g00287 348 SMART Brix_2 38 290 IPR007109 GO:0006364|GO:0019843
Cca04g00287 348 ProSiteProfiles Brix domain profile. 35 296 IPR007109 GO:0006364|GO:0019843
Cca04g00287 348 PANTHER PETER PAN-RELATED 9 345 IPR045112 -
Cca04g00287 348 MobiDBLite consensus disorder prediction 304 348 - -
Cca04g00287 348 PANTHER BNAANNG34990D PROTEIN 9 345 - -
Cca04g00287 348 MobiDBLite consensus disorder prediction 316 348 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00287 K14859 - gmx:100800809 583.563