Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00285 ATGGCTCCCGGGCGTCGCCGCGGAGCGAACAAGGCGAAGGCGAATGGGCACTTGACTCTCGGCGATCTTGTCCTCGCTAAGGTCAAGGGCTTCCCCGCTTGGCCTGCTAAGATAAGCAGGCCTGAGGATTGGGAGAAAACCCCTGATCCGAAGAAGTATTTTGTTCAATTCTTTGGTACGAAAGAAATAGCTTTTGTTGCCCCAGCAGATATTCAGGCATTTACCAATGAGGCTAAAAATAAGTTGTCTGCTCGTCTTCAGGGCAAGACAAAGTACTTTGCCCAAGCTGTGAAGGAAATATGTGCAGCATTTGATGAGATGCAGAAACAGAAAGCTAGTGGTTTGACAGATGACACTGATGATTCTCATATTGGTTCAGAGGCTCCTTCTAATGATGGGGTAGTAGGTAACCTAAAGGATAATACTGATGCAGTGGTGTCAAATGGAGGAAAAGATAATGTTGATATGGATAATGTTGGCTCTAATTTGGAGCACTGTATGCCGAGAGTTGGAGAAAATGACAGTCAAGATGAAAAGCTCTCTGTATCTGACCATCCAAATGAAAGTTCTTCTGTTTCATCTCCTGTGATGAAAAATAAATTATCCTCTGGTTCAGAGGCAAAGAAGAATGTTCACAAATCTAGTCTTAAAGATGCTTGTAATGTTAATGATTTTGGGCAAGATGATAATGGACATAGTGATTTAACAAATGGGACCAAGCCAAGAAAGCTTGTTAATGGCTCAAGGAAGAGAAGTGAAGCTGCAGGTCATAGAGACAGAAATGGTGGATCATCTACTGGAAAATTTTTGGAGGGAAATTATACTGGTCATGGTGATCTTTCTAAGTCTGAGGAGACATTGAAAACTGGGAAGAAAAGGAAAAATGCATTTGCTGTTAAATCAGATTCTCCAGATACTCTTAAATCAGACAATAATGGTAATACTGGGGAAAAAGATAGCAACTTGATAAAAGTCAAAACAAGTCTTGAGGTAAAAAATGAGCTGCAGGAAATCTCGTTTGATTCTGAGGATGGTGATGGTAAAAGTTCTAGTTTGCGTAAGAAGACCCTGTTTCATGCAAAGCATAATGTAGGAGCAAATGAACCTTTACATGCTACCAAGAAGTTGAAGCGTATGGATGCCCAAGATGATTCAACTGTAGGATATTCTTCAAAAGTTCCAAAAAGAGCTTCACCTGGCTCTACAGTTTTTGAAGACAGATCATTTAAAAAATTAGAATTGAAGAAGTCTACACCAAATTTGAAAACAGAAAAAAGCTTGCCATCTAAAGGTCAAATTGGTGGTGCAGGTTCTGATGATTCTGTCAATGAGTTGCTACCCGCAACTAAACATCATAGCCAGGTTCATCAAGTTATGCCTGATTCTGCTGGCATTGCTTCTGATGAAAAGAAAGAAAGGAGTTCTCTTAGACATAAAGTTGATACAAATAATGTTATGATAAAACAAGTTGAGAGGAAACGCAGAGCTGTTTGTCTTTTCGATGACGATGATGAACCTAAAACTCCTGTTCATGGAGGAGCTGCTAAAAATATTAAATCGTCTTCTGTTTCAGAGGTTAAGAAGACCAGCAATGCGCACCCAGAGAAGTCTGAACCTAAAACTCCTGTTCATGGTGGAGCTGCAAAAAATATTAAATCGTCTTCTGTTTCAGAGGTAAAGAAGACCAACAATGCACACCCAGAGAAGTCTGATGTTGTTCAGATGGCTCAAAGGAATTCTAGTGAACTTGAGGATACCCATTCGAAAGAGCCATCTTCTCAATTACATAATGACGGTTTGTCAATTAAGCAGCCTCTAAAAGAGAAAGATGATGAAGTGATTCCTTTGCATGTTCCTAATAGTCCTGAAAAATTAGATTTGAAGCAGTTTCCCTCCAATGCGGCAAAATTAAGCTCTGTCTCTCCAGTAAAATCACCTCAGCCAGTACCGGCAATTAAGTCAAATGCTGAGCGGAATAAAGCTTCCAAACTTTCGATTAAAAATTCCATTAATGCTACTCAAAAGAGGGCTGATCATGGGTCTTCAAAGTCTTCACATAACCTTAGCTCTTCTCAGAATCAAGTTGCAACTCATAGAAAGAAGCTTGCATCTTCTGCAGAAATTTCTAAAACTACTCCAGAGACATTGCCTCAGGCAGTTGAAGCTCCTGCCTCAACTGTTGGTTTTAAGGATCCTGATGATCTACATGTTGATAGATTGGAGGTGGGCACAGAAGAGAAAAATAGTATATATACCGGTTCTGGGACTCCTGAAACTGCCAAAACTATGAAGCATCTTATTGCAGCTGCCCTGGCAAAAAGGAAACAAGCTCATTCTCAATGTCTTCCTTCTGGCTTTCCCAATGTTCAGGGGGGGACACCTAGCCCCTCCACAGTTCAGCCATTTCTGCCTGTCTTGAGCAATTTTGTGCAGGCAGATATGCAGGGAGTTTATGAGCAGACAACATTGGCTTCTCCACCAACTAAAGAGCATCACTCTGCTTCTCATACTCAACTTGATGCTGATGAAATTGAGGACAGAAGAATTGGTTCAGCGCAAAGGGGAATAGAAGGCTCACTGAGTGGTGGTACTGAGGCTGCTGTTTCTCGTGAAGCTTTTGAAGGAATGATTGAAACCTTGTCAAGGACCAAGGAAAGTATTGGCCGTGCAACTCGTCTTGCTATTGATTGTGCCAAGTATGGCATTGCCAACGAGGTTGTTGAACTTCTCATCCGAAAGCTGGAAAATGAAACTAGTTTTCATCGTAAAGTGGATTTATTTTTTCTTGTTGATTCTATCACTCAGTGCTCGCATAATCAAAAAGGCATTGCAGGAGCCTCCTACATACCTACTGTTCAGGCAGCATTGCCACGCCTTCTTGGTGCTGCTGCTCCCCCTGGAGCTAGTGCTCGTGAAAATCGCCGTCAGTGTCTTAAGGTTTTGAGGCTGTGGCTTGAGAGGAAAATTTTTCCTGAATCTGTTCTGCGCCGTTACATGGATGATATTGGAGTTTCAAATGATGATATGACAGTTAGCTTTTCTCTTAGACGTCCATCTCGAGCAGAGAGAGCTGTGGATGACCCAATTAGAGAAATGGAAGGCATGCTTGTTGATGAGTATGGAAGTAATGCTACATTTCAGCTGCCTGGCTTTTTATCTTCACGTCCATTTGAAGATGATGAAGATGAATATGAAGATGATATACCAATCAATTCATGTAAGGAGACGTGTGATGCATCTCCAGCTGATCCCACACATATCCTTGGAGAATCAGAAACTTCTACTGTTACCCCAAATGACAAGCGCCATTGTATCTTAAAGGATGTGGATGGTGAGCTGGAAATGGAAGATGTTTCAGGTCACCCGAAGGATGAAAGGCCCCTATTTTTTAACAGTTCTGAAGAAATTGATTTGCAACATCAGGGCTCAGATAGGAATATAGATCCAACTGCAAACATTTCAGAAGAGATGTCAGCTACTCCTGACGGTTCTCCTCCTATGCCACTTGATTCAcctcctccacccccacctttgccttcatcacctccgccaccacctcctccattgtcaccatctcctcccccgcctcccccacccccaatgttgcaacccccacctcctcctttaccaccCTCCGCAGCTCCTCCGGTGTCATTGGTTCCTCAATCGTCTGGACCAGCTCGGCCACTTCTCTCCCAGTCATTAATGCCACCTCAGTCTGCGCATCAGTCGTCCCCACAGTTGGGGTATCAGCAGAGTGTACCTCATGACTTTAGTGGCACTACTAATGGTAACCAAATAGTTCCAATGGCTGGGAATTCTTTTCCTGGAGGTCACAATAATGCAGTTGTCCAGAATGAAGTATTTCCACAGCCATCTGCTTATGCTCCAGCAGCAGGCTGTAGCTCCCAGGAGCCTTCTGGTTTTAACCATTCCAGGCAATTAGAATACGGACAGAATGATATGTTTTTAAATGCTCCAGTTCCTCAACCTAACCATCAATTTCAGCAGAGCAATCCCCCATTTGTTCAGAGGCATGCTCATCCTGCTCCACCGCAAAATCCACCAAATCCATACTCATATTCAAATCCCACAGTTCAGCAACATCTTCCTCATTCATTCCATCCCCCCTTTCCTTTACCATCCCTTCCAGATGGTCGGAGACAATTTGTTGCTGATGAGCAATGGAGAGTGCCATCGAGTGAATTTAAAACAAATAATCAGCATGGTGTATGGAGAGGGAGAAATCCTTCATGTCCCGGTCCACCCTACGGGCAAGAAGGTCATTTTCGGCCAACACTTGAAAGACCACCAACATTCCTGCCGTTAATTGTTGGAGACCCAATTGAAGTTGATTGGAGCCATCTTATTAGTAGTAGTGGTGTTGCTGGTGGATCAACATGCAAGGCCCATGTTTTTGACTTGGTTTTGGCAAAGCCAAAGATGTTCATCTTCATAGACAAAGACTGCTTATTATTGAGGGATGTAGAAGCGAAATTGGCTTGCAAGTTTTCATGTAAGGATAACCTGTGGCCATTATTTGGAAAGTCTGTACAGAAAATTGCATGTCGAATGGGTGTTCTCGTATTCACACGAGATAAAAGGGGACCAATGGATGAATAA 4623 0.4127 MAPGRRRGANKAKANGHLTLGDLVLAKVKGFPAWPAKISRPEDWEKTPDPKKYFVQFFGTKEIAFVAPADIQAFTNEAKNKLSARLQGKTKYFAQAVKEICAAFDEMQKQKASGLTDDTDDSHIGSEAPSNDGVVGNLKDNTDAVVSNGGKDNVDMDNVGSNLEHCMPRVGENDSQDEKLSVSDHPNESSSVSSPVMKNKLSSGSEAKKNVHKSSLKDACNVNDFGQDDNGHSDLTNGTKPRKLVNGSRKRSEAAGHRDRNGGSSTGKFLEGNYTGHGDLSKSEETLKTGKKRKNAFAVKSDSPDTLKSDNNGNTGEKDSNLIKVKTSLEVKNELQEISFDSEDGDGKSSSLRKKTLFHAKHNVGANEPLHATKKLKRMDAQDDSTVGYSSKVPKRASPGSTVFEDRSFKKLELKKSTPNLKTEKSLPSKGQIGGAGSDDSVNELLPATKHHSQVHQVMPDSAGIASDEKKERSSLRHKVDTNNVMIKQVERKRRAVCLFDDDDEPKTPVHGGAAKNIKSSSVSEVKKTSNAHPEKSEPKTPVHGGAAKNIKSSSVSEVKKTNNAHPEKSDVVQMAQRNSSELEDTHSKEPSSQLHNDGLSIKQPLKEKDDEVIPLHVPNSPEKLDLKQFPSNAAKLSSVSPVKSPQPVPAIKSNAERNKASKLSIKNSINATQKRADHGSSKSSHNLSSSQNQVATHRKKLASSAEISKTTPETLPQAVEAPASTVGFKDPDDLHVDRLEVGTEEKNSIYTGSGTPETAKTMKHLIAAALAKRKQAHSQCLPSGFPNVQGGTPSPSTVQPFLPVLSNFVQADMQGVYEQTTLASPPTKEHHSASHTQLDADEIEDRRIGSAQRGIEGSLSGGTEAAVSREAFEGMIETLSRTKESIGRATRLAIDCAKYGIANEVVELLIRKLENETSFHRKVDLFFLVDSITQCSHNQKGIAGASYIPTVQAALPRLLGAAAPPGASARENRRQCLKVLRLWLERKIFPESVLRRYMDDIGVSNDDMTVSFSLRRPSRAERAVDDPIREMEGMLVDEYGSNATFQLPGFLSSRPFEDDEDEYEDDIPINSCKETCDASPADPTHILGESETSTVTPNDKRHCILKDVDGELEMEDVSGHPKDERPLFFNSSEEIDLQHQGSDRNIDPTANISEEMSATPDGSPPMPLDSPPPPPPLPSSPPPPPPPLSPSPPPPPPPPMLQPPPPPLPPSAAPPVSLVPQSSGPARPLLSQSLMPPQSAHQSSPQLGYQQSVPHDFSGTTNGNQIVPMAGNSFPGGHNNAVVQNEVFPQPSAYAPAAGCSSQEPSGFNHSRQLEYGQNDMFLNAPVPQPNHQFQQSNPPFVQRHAHPAPPQNPPNPYSYSNPTVQQHLPHSFHPPFPLPSLPDGRRQFVADEQWRVPSSEFKTNNQHGVWRGRNPSCPGPPYGQEGHFRPTLERPPTFLPLIVGDPIEVDWSHLISSSGVAGGSTCKAHVFDLVLAKPKMFIFIDKDCLLLRDVEAKLACKFSCKDNLWPLFGKSVQKIACRMGVLVFTRDKRGPMDE 1540
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00285 1540 ProSiteProfiles CID domain profile. 865 1006 IPR006569 -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 1078 1102 - -
Cca04g00285 1540 SMART 558neu5 872 1003 IPR006569 -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 378 476 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 636 733 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 216 243 - -
Cca04g00285 1540 Pfam CID domain 871 996 IPR006569 -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 1154 1264 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 112 321 - -
Cca04g00285 1540 SMART PWWP_4 18 75 IPR000313 -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 1225 1264 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 658 719 - -
Cca04g00285 1540 PANTHER PROTEIN HUA2-LIKE 1 536 1439 - -
Cca04g00285 1540 PANTHER PROTEIN HUA2-LIKE 1 1 528 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 170 184 - -
Cca04g00285 1540 ProSiteProfiles PWWP domain profile. 20 77 IPR000313 -
Cca04g00285 1540 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 1 528 - -
Cca04g00285 1540 PANTHER HEPATOMA-DERIVED GROWTH FACTOR-RELATED 536 1439 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 502 599 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 302 321 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 1165 1217 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 823 844 - -
Cca04g00285 1540 CDD HDGF_related 18 103 IPR035496 -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 406 420 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 281 299 - -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 1330 1357 - -
Cca04g00285 1540 Gene3D - 10 114 - -
Cca04g00285 1540 SUPERFAMILY Tudor/PWWP/MBT 13 110 - -
Cca04g00285 1540 Pfam PWWP domain 21 104 IPR000313 -
Cca04g00285 1540 MobiDBLite consensus disorder prediction 185 204 - -
Cca04g00285 1540 Gene3D - 864 1009 IPR008942 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00285 Cca-Chr4 2738392 2757291 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00285 - - ccaj:109798832 2590.84