Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00266 ATGGCCACGACCACTCTGACAACCCTCACCCTCCGCACCCCAGCTTGTCCTACACCCTCCTCCTACCCTGCCACAAGGCCATTCCTCCAATTCCCCAGCCGCTCcgcagcgcgccgcggccggctcgtcgcccccgcggtcgccgcgcCGGAGAAAATCACGAAACTCGGCGACGAAATCGCCGGACTGACCCTGGAGGAGGCGAAGAGCCTGGTGGACTTCCTGCAGGACAAGCTgggggtgtcggcggcggcgttcgcgcccgtggccgcggtggccgctcccggaggcgcggcggtggaggccccggcggcggtggaggAGAAGACGGAGTTCGACGTGGTGATCGAGGAGGTGCCGAGCAACGCTCGAATTGCGGTGATTAAGGCGGTGAGAGGGTTGACGAGCCTTGCGCTGAAGGAGGCGAAGGAGTTGATCGAAGGCTTGCCCAAGAAGTTCAAGGAAGGGGTTTCCAAGGAAGAAGCTGATGATGCCAAGAAGCAACTTGAAGAAGCTGGTGCCAAAATTGCCATTGTTTAG 540 0.4278 MATTTLTTLTLRTPACPTPSSYPATRPFLQFPSRSAARRGRLVAPAVAAPEKITKLGDEIAGLTLEEAKSLVDFLQDKLGVSAAAFAPVAAVAAPGGAAVEAPAAVEEKTEFDVVIEEVPSNARIAVIKAVRGLTSLALKEAKELIEGLPKKFKEGVSKEEADDAKKQLEEAGAKIAIV 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00266 179 Gene3D - 108 178 IPR014719 -
Cca04g00266 179 PANTHER 39S RIBOSOMAL PROTEIN L12 1 178 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cca04g00266 179 PANTHER 50S RIBOSOMAL PROTEIN L12-1, CHLOROPLASTIC-RELATED 1 178 - -
Cca04g00266 179 Pfam Ribosomal protein L7/L12 C-terminal domain 112 178 IPR013823 GO:0003735|GO:0006412
Cca04g00266 179 SUPERFAMILY ClpS-like 107 178 IPR014719 -
Cca04g00266 179 Hamap 50S ribosomal protein L7/L12 [rplL]. 48 179 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cca04g00266 179 SUPERFAMILY Ribosomal protein L7/12, oligomerisation (N-terminal) domain 52 114 IPR036235 GO:0003735|GO:0005840|GO:0006412
Cca04g00266 179 CDD Ribosomal_L7_L12 51 178 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cca04g00266 179 Gene3D Single helix bin 51 107 IPR036235 GO:0003735|GO:0005840|GO:0006412
Cca04g00266 179 TIGRFAM L12: ribosomal protein bL12 54 178 IPR000206 GO:0003735|GO:0005840|GO:0006412
Cca04g00266 179 Pfam Ribosomal protein L7/L12 dimerisation domain 52 99 IPR008932 GO:0003735|GO:0005840|GO:0006412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00266 K02935 - gmx:100779891 223.016