Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00263 ATGACGCGACCTTACGGTGTGAAGGGGCGGAAGCGAAAGCACGCCGAACCCAAATACGACGCCGAAGAAGAAGACCAACAAGCCCAACAGCCAAACAGAACTGTGGTCGAGAACGATGAACCAACGCCAACACGGAAGAGAACTGTGGCGGAGAACGAAGAAGCAACACCAACACCAACACCAGCTTCAACCGAGGACAATGAATTGAGCGGTATTCCAATTGCGCCAAGCGAGAACAACACTACCAAACCCAACGTCATCTTCATTCTCGAAAAAGCTTCATTGGAAGTCGCCAAAGTTGGCAAGACATATCAGCTTTTGAACTCCGACGACCATGCCAATTTCCTCCGCAAAAATAACAAGAATCCCGGTGATTACAGGCCCGACATTACGCATCAGTCCCTTTTATCTATTTTGGATAGTCCACTGAATAAATCTGGGAGATTGCGAACAGTATACATAAAGACTGAAAAAGGTGTCCTTATAGAGGTTAAGCCCTTTGTTCGTATTCCCAGAACATTCAAACGTTTCGCTGGTGTCATGTTGGAACTGCTTCAAAAATTGAGCATATCTGCTGTTGGCAAGCGTGAAAAACTTCTCCGTACTGTCAAGAACCCTGTGACACAGTATTTGCCTGTCAACTCGCGAAAAATAGGTACGTTGTGTTCTTGA 672 0.4613 MTRPYGVKGRKRKHAEPKYDAEEEDQQAQQPNRTVVENDEPTPTRKRTVAENEEATPTPTPASTEDNELSGIPIAPSENNTTKPNVIFILEKASLEVAKVGKTYQLLNSDDHANFLRKNNKNPGDYRPDITHQSLLSILDSPLNKSGRLRTVYIKTEKGVLIEVKPFVRIPRTFKRFAGVMLELLQKLSISAVGKREKLLRTVKNPVTQYLPVNSRKIGTLCS 223
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00263 223 SUPERFAMILY alpha/beta knot 74 220 IPR029028 -
Cca04g00263 223 Pfam EMG1/NEP1 methyltransferase 88 220 IPR005304 GO:0070037|GO:0070475
Cca04g00263 223 MobiDBLite consensus disorder prediction 13 27 - -
Cca04g00263 223 MobiDBLite consensus disorder prediction 53 67 - -
Cca04g00263 223 PANTHER NEP1/MRA1 19 222 IPR005304 GO:0070037|GO:0070475
Cca04g00263 223 Gene3D - 86 223 IPR029026 -
Cca04g00263 223 MobiDBLite consensus disorder prediction 1 81 - -
Cca04g00263 223 CDD Nep1-like 86 220 IPR005304 GO:0070037|GO:0070475
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00263 Cca-Chr4 2555942 2557118 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00263 K14568 - gmx:100778294 330.102