Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00236 ATGGAAGAAGAGACAAAAGTGATATCAGAAGTTTCGGTGACAAAGGTTGTTGAGGAGGAAGTTCATAAGAAGGACAGCATTAAGGAGACAAACGGAGAGTTGCAGAGTGAAGTAAAGAAAGAAGAGGAAGAGAATGCGCTTGATGGCGAATTCATTAAAGTTGAGAAAGAAGAGAATGCCATAGATGATAAGTCCCATAAAACTGAAAGAAGCTCAGATTCTCCAAGCAGAGAATTTCTGGAAGCTCAAGAGAAGATGCAAGAACTTGAGGTTGAACTCCGAAGACTAACAGAATCTTTGAAGACCTCTGAGCATGAAAATGATCAGCTGAAGGGAGAGATCTCAGTTACCAAAGAGAAATTTGAGGAACGTGAAAAGAAATATGAAGAGCTCGAACTGAGTCACAAGAAATTGCAAGAGCAGATTCTTGAATCTGAGAATAAATACAATCAGCAGCTCAGCACTCTTGAAGAGGCACAGCAAAATCATGAAGTGAAGCAGAAAGAGCTTCTTCATGTGAAGGAAGCATTTGATGATATGAACCTTGAGCTTGAAAACTCCAGAAAGAAGATGCAGGAATTGCAGCTTGAGCTGCAACTTTCAGCAGACGAGGCCCGGAAATTTGAGGAGCTGCATAAGGAAAGTGGTTCACATGCTGAATCTGAGGGAAAGAAGGCTTTAGAATTTGAGAGACTACTTGAAGAAGCCAAATTGAGTGCAAAAGGAATGGAAGATGAGATGGCTTCCCTTAAGGAAGAATTGAAGGGAGTTTACGAGAAGATTGCTGAAAATCAAAAGGTTGAAGAAGCACTTAAAACAACTGCAACGGAACTCTCTACCATTCAAGAGGAGTTGACACTCTCGAAATCCCAGCTATTGGAAGTTGAGAAAAGACTGTCTTCAAGGGACTCTTTGGTGGATGAGTTGACACAGGAATTAAACCTGATCAAGACTTCAGAAACACAGCTAAAAGAAGACTTGTCAGCACTTCAAAATCTATTTGCCTCTACGAAGGAAGAATTGCGAGAAAAAAATTCTGAGTTGGAAACTGCAAGCTCCAAGTTGCAGGAGGAGGAAAAATTGAGGGAATCAGTTGAAGCTGCATTCAAGAGTCAGGAAGCACAGTTTCTCACTGCACAAGAGGAACTCACTAAACTTAAAAAGGCAAAAGAAACTCTTGAAGCAACCGTGGAAGATCTAACCAGTAATTTGAAGAAGTTTGAGGAGTTGAGCACTGATTTAGAGGAAAAGCTAAAGCTCTCTGATGAAAATTTTCTTAAAACCGATTCTCTTTTATCTCAAGCACTTTCAACCAATGCAGAGCTTGAGGAGAAGGTGAAGTATTTGGAAGATCTTCATAATGAATCTGGAGTTGCTGCAGCTACTGCCACACAAAGAAGTCTTGAACTTGAGGGACATATTCAGACATCAGTTGCAGCTGCAGAAGAGGCAAAAGCACAATTGAGGGAGCTGGAAATACGTCTCATAGCAGCAGAGCAGAGGAACGTGGAGCTTGAGCAACAATTAAACTTGGTACAATTGAAAACCAGTGATGCTGAGAGAGAAGTGACTGAATTCTCTGAGAAAATATCTAATCTCAACTCTAAATTGGAAGAGGCCGAGGAAGAGAAGAATATTCTTAACCGCCAATTGCAGGAATACATGGAAAAGGTAGTTCAACTTGAATCAGACTTAAATCAATCATCTCTACGGAGTTCACAATTAGAGGAGGAGCTGAAGATAGTCAATGACAAATGTTCTGAGCATGAGGACCGAGCCAGTATGAACCATCAGCGTAGCCGAGAACTGGAAGATTTATTCCAGAGCTCTCACTCCAAGTTTGAAGAGTCTGATAAAAAGGTGAGTGAGTTGGAGTTGTTACTTGAAGCAGAGAAATACAGAATTCAGGAACTTGAACAACAAATAAGCACGTTAGTAGAGAAATGTAGTGTTTCAGAAGCACAAGCCAATAAATACCTCGATGATTTGTCTAATCTGACATCAGAACTTGAGGCCTTTCAAGCACAAACCTCAATCCTCGAAGTTACACTGCAAGAAGCTAATGTAAGAAGAAAGGAGTTAGAAGATTCTTTGAATGCAGTGACAGATGAAAAGAAAAGGCTAGAAGATGCTTCTAGCAGTTTGAATGAGCAGCTTGCTGAGAAAGAAAACCTATTGGAAATTTTGAGGGATGATTTAAATATCACACAAGTTAAATTGCAAAGCACTGAAAGTGACCTCAGGGCGGCTGAATTGAGAGAGAGTGATCTAATCGAGAAACTAAAAGCTTCTGAAGAAAGTCATGTCATAAGGGGAAGAGATATAGAAGAGACTACTGCAAGGCACTCGGAACTTCAATTGTTGCATGAGTCTCTGAAGAGAGATTCAGAACAGAAACTCCAAGAAGCTATAGATAAATTCAACAACAAGGACTCTGAGGTTCAGTCTCTGCTTGAGAAAATTAAGATTTTGGAAGAACAGGTGGTAGGGGCTGGGGAACAGTCTACATCCTTGAAGAATGAGTTTGAAGAGAGTTTGAGCAAACTGGCTTCTTTGGAAAGTGAAAATGAAGATTTGAAACGGCAAATTTTAGAGGCAGAGAGCAAGAGTTCTCAGTCTTTTACTGAAAATGAATTATTGGTTGGAACAAACATTCAACTAAAAACCAAAATTGATGAACTTGAGGAATCATTGAACCGAGTTCTATCAGAGAAGGAAGCTGCTGCACAAGAACTTGTGTCTCATAAGAACAGCATAGCTGAACTGCACGATTTACAATCAAAATCCTCTGAAATTCAACGTGCAAATGAAGCTCGCATTCTAGAAGTAGAATCACAATTACAAGAAGCATTGCAGAGGCATACTCAGAAGGAATCAGAAGCCAAAGAATTGAACGAGAAACTGATTACACTAGGGGGGCAAATAAAGCTTTTCGAAGAGCAGGCACGTGAAACAGTTGCAACTTCTGACACTCATAAAGCTGAGTTGGAGGAGAGTCTCATAAAATTAAAGCATCTTGAAACTGTCATTGAGGAACTGCAAAACCAGTCACTCCACCGTGAAAAAGAAACTGCAGAGCTAAATGAGGAAAAATCAAAGCTTAATCAGGAAATGGCTATCTATGAATCCAAATTAAGTGATTTACAGTCAAAGCTGTCTGCAGCACTTGTTGAGAAGGATGAAACAGTTAAAGAGATATTTGCCTCAAAGAATGTCATCGAAGAATTAGTGACAAAGCATAGTGCAGAAGTGCAGACATTAAATTCACAGATATCTTCAATGTTGGATGAGAAGAACTTGCTGAATGAGACTAATCAGGATTTAAAGAAGGAACTTCAGTCTCTGATATCTGACCTTGAAGTGAAGTTGAAGGAACAACAGAATATTGAAGGCTCTCTGAGATCCGAGGTTGAAACTCTCAATACTGAGATTGCTGAGAAATCTGCGTTGCAAAGGAAGCTGGAGGAAATTGAAGGGCAACTGACAAAAGCTGAATCTAGACTAAACGAAGAGGTTGGAAGTGTTCAAGCTGCTGCGTCTCAAAGGGAAGCAGAATTAAGTTCAAAATTGGAAGACTATGCACAAAAAATCAATGATAGAAATGTGCTGAATGAAAAGGTTGCAGAACTTGAGAAAGAGTTGCAACTTGCACGGGACGCTGTTGCTAACCAGaaaGGAGCAGAATCTCAGAAGTTGGAACTAGAGGTAGCCCTGAAGAATTCTCTTGAAGAACTTGAAACTAAGAAAAAGGATATCTCTCTTCTACAGAAACAAGTGACAGATCTAGAGCAGAAATTGCAAGTGGCTGGTGATAAATCCACAATTAAGGGTGATGAGGGTGTTGAACAGAAAGATGGGGTAGAAGTAAAATCCAGGGACATTGGATCAAGCCTCTCGACTCCATCAAAAAGAAAGAGCAAGAAAAGGACAGAAGGAACAAGTGCTCAAACATCATCTTCGTCCGAGACAAATGTTCGAACAGGACAGGATTCGCCTGTCATAAATTTCAAGTTCATCTTGGGAGTAGCTCTTGTGTCCATTGTCTTTGGCATAATTCTTGGGAAGCGTTACTAG 4074 0.4018 MEEETKVISEVSVTKVVEEEVHKKDSIKETNGELQSEVKKEEEENALDGEFIKVEKEENAIDDKSHKTERSSDSPSREFLEAQEKMQELEVELRRLTESLKTSEHENDQLKGEISVTKEKFEEREKKYEELELSHKKLQEQILESENKYNQQLSTLEEAQQNHEVKQKELLHVKEAFDDMNLELENSRKKMQELQLELQLSADEARKFEELHKESGSHAESEGKKALEFERLLEEAKLSAKGMEDEMASLKEELKGVYEKIAENQKVEEALKTTATELSTIQEELTLSKSQLLEVEKRLSSRDSLVDELTQELNLIKTSETQLKEDLSALQNLFASTKEELREKNSELETASSKLQEEEKLRESVEAAFKSQEAQFLTAQEELTKLKKAKETLEATVEDLTSNLKKFEELSTDLEEKLKLSDENFLKTDSLLSQALSTNAELEEKVKYLEDLHNESGVAAATATQRSLELEGHIQTSVAAAEEAKAQLRELEIRLIAAEQRNVELEQQLNLVQLKTSDAEREVTEFSEKISNLNSKLEEAEEEKNILNRQLQEYMEKVVQLESDLNQSSLRSSQLEEELKIVNDKCSEHEDRASMNHQRSRELEDLFQSSHSKFEESDKKVSELELLLEAEKYRIQELEQQISTLVEKCSVSEAQANKYLDDLSNLTSELEAFQAQTSILEVTLQEANVRRKELEDSLNAVTDEKKRLEDASSSLNEQLAEKENLLEILRDDLNITQVKLQSTESDLRAAELRESDLIEKLKASEESHVIRGRDIEETTARHSELQLLHESLKRDSEQKLQEAIDKFNNKDSEVQSLLEKIKILEEQVVGAGEQSTSLKNEFEESLSKLASLESENEDLKRQILEAESKSSQSFTENELLVGTNIQLKTKIDELEESLNRVLSEKEAAAQELVSHKNSIAELHDLQSKSSEIQRANEARILEVESQLQEALQRHTQKESEAKELNEKLITLGGQIKLFEEQARETVATSDTHKAELEESLIKLKHLETVIEELQNQSLHREKETAELNEEKSKLNQEMAIYESKLSDLQSKLSAALVEKDETVKEIFASKNVIEELVTKHSAEVQTLNSQISSMLDEKNLLNETNQDLKKELQSLISDLEVKLKEQQNIEGSLRSEVETLNTEIAEKSALQRKLEEIEGQLTKAESRLNEEVGSVQAAASQREAELSSKLEDYAQKINDRNVLNEKVAELEKELQLARDAVANQKGAESQKLELEVALKNSLEELETKKKDISLLQKQVTDLEQKLQVAGDKSTIKGDEGVEQKDGVEVKSRDIGSSLSTPSKRKSKKRTEGTSAQTSSSSETNVRTGQDSPVINFKFILGVALVSIVFGIILGKRY 1357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00236 1357 Coils Coil 79 211 - -
Cca04g00236 1357 Coils Coil 940 981 - -
Cca04g00236 1357 Coils Coil 621 676 - -
Cca04g00236 1357 Coils Coil 306 424 - -
Cca04g00236 1357 SUPERFAMILY Tropomyosin 608 851 - -
Cca04g00236 1357 Coils Coil 1193 1227 - -
Cca04g00236 1357 MobiDBLite consensus disorder prediction 1276 1291 - -
Cca04g00236 1357 Coils Coil 996 1051 - -
Cca04g00236 1357 Coils Coil 24 44 - -
Cca04g00236 1357 MobiDBLite consensus disorder prediction 24 80 - -
Cca04g00236 1357 Coils Coil 1231 1272 - -
Cca04g00236 1357 Coils Coil 1140 1174 - -
Cca04g00236 1357 Coils Coil 1091 1129 - -
Cca04g00236 1357 Coils Coil 775 869 - -
Cca04g00236 1357 Coils Coil 264 284 - -
Cca04g00236 1357 Coils Coil 226 260 - -
Cca04g00236 1357 PANTHER EARLY ENDOSOME ANTIGEN 1 1357 - -
Cca04g00236 1357 Coils Coil 432 452 - -
Cca04g00236 1357 Coils Coil 884 911 - -
Cca04g00236 1357 MobiDBLite consensus disorder prediction 1312 1327 - -
Cca04g00236 1357 SUPERFAMILY Tropomyosin 380 611 - -
Cca04g00236 1357 Coils Coil 684 767 - -
Cca04g00236 1357 MobiDBLite consensus disorder prediction 1276 1327 - -
Cca04g00236 1357 Coils Coil 474 592 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00236 - K20283 gmx:100801514 2103.56