Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00219 ATGACGATTGCGTGGTTATGGAACCTGTGGCCCTTCAGAGTGGACGAGTTGAGAGGCTCGAAGCAATTGGTGAGCAAACTGAATTTACCCGAAGACACCAAGCAATTCGTCTTGGTTCTCCGCGACCCCCAAACCCAATCCCTAATTTACATTCTCTCCTCTCTTAACCTATCGGAGCGATCGGCCTCTGATGCCGAGTGCCTCATCCGGGAGATCAAACCCGACGCTGTTTTGGTGCAGGCAGCAGTTTCCGCCTTCTCCGAGGAAGAAGACTCCCTTCCGTTGCCGACTTCTTCTTTCGGGGTAATCAAACGCTGTTTTCTTGATAAAATTGGCAGGGACGTGTATGAGAGTGTTGCAGGTAACTTGGTGCTGAGGGAGATTTTCGGGACCAGTTTTCATGGCCCCTTGTTGGCTGCTAAGAGAGCTGCTGAGGATGTTGGATCATCGTTTCTTGTTATTGAATCTCCCTCTAGTTGGGgtgatagtaatagtaatagtagtggtgatgataattgtggtgtgattgataggagtagtagtTTTCGAAGTCTTGTTCATAGTTTGGTTCCTCAGCAGCAGCAGCATGCTGCATCTTTGGCCCCTCCGGCTTTGAAGAGGTTTTCTCTTGATAAGGAACTTAGGGTGATGTTGGCTAGGGCTTTATCTGGTTATTTGGATCCACTTTTGCTTAGTGGTAACAATGGTGGTGTTAGTTCTGTTTTGGAGATTCAGCCATCAACTAGTTTTGAGACTCCGGGTTTTGCTAGGTCGATTTATCCGTTGCTTGAGGATTTGTATGAAATATTTGGCGATCTTCCGTCGATTGGGAAGGCGCTTGCGCATGTGCAGAAGATGTTGTTGGATGTGAATAGAGGGGAGGTTCTTGACAAAAGAACTGTTTCTGAGGTGTATACTTTCCGAATTGCTGTTGAGGGACTTAGAATTGCTCTGAATAATAAGGGGTTAAGGCCGATTAACAGGAAGGGTGGTGCCAAGTCAGATAAGGTCGAGTTCTCGGAGCTTCCGGCTGATGACAAGTTGCATGCGCTCTTTGCTCACGCTATCCGGAGCCAGACTGAGAAGTTTACGACAATTGTGGCGGTGGTAGATGCTAGTGCCTTGGCTGGTATTAGGAAATACTGGGATACTCCTCTTCCTGTTGAAGTTAAAGAGCTGGTTGGACAACTGATCACGAATTCTGAAGGTAAAGGGGTTATGTTAAATCATGGTGACAAGAAAAGGTTGTTAACGGATAAACCTATGGTGGCAGTTGGGGCTGGAGCGACAGCAGTTTTAGGAGCTTCATCACTGACCAAAGTGGTCCCTGCATCAACACTGGTGAAGGTTCTTTCTTTCAAAACTCCAGCTTCGCTCAAATTCGGTCTAAGCCAGATACAGAAAGTGCTGGCTTTTGCCTTAGGCCCTTCTAAAGTTGTTGCTCCAGGGGTTGCAACTTCAGGAGCCAAAACGTCGGGCATCATGAAGGTGGCAGTATCTGCTGAAAAAATTCGAGCTGTTACTCACAGTGTTATAGCTTCTGCTGAAAAAACCAGTATTTCAGTCATGAGAACAGCTTTCTATGAAATAATGAGGAAGCGAAAGTTGCGGCCTGTTGGGTTCTTGCCTTGGGCTACATTTGCTGGCAGTATTGGAACTTGTTCAGGCCTGCTTTTATATGGTGATGGAATTGAGTGCGCTGTTGAGTCTCTCCCTGCAGCTCCCTCAATTGCCAGTTTGGGTCGTGGAATTCAACATCTACGGGAGGCTGATGAAAAATTGATTGAATCCTTCTCATACATAAGGCATGCCTTTCACCTCCCAGATTTTCCCTACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTCCCAGATTTTCCCTACATATATGCATTCCAACCGCAAAATTCAAGCACACCAGGGAATCCTTCTTGTGCAGCCTCTTTTGGAATTTTCAAAGGAGGATATGTACAAGATATGCCTAGGAGGTAGTGAGGATTGGGTAGAAGACCCAACAAATCAAAGCCAATTATATGCACATAATAGGATACGACTGGTGCTTAATAATTTGTCATCTTATCAGGTGATGGAATCTTTTGAGTCGCACCCTTATGGACAACAAGGGAATTTTGTTGCCAAAGAGTTAGAAAAAAGTATAGAGGATGAGAACTCATACGCAAATCACTTGGTTCCAAATGCAACAGTTGTCCACTTTTTGGATGTGAATCCTGAGTAG 2472 0.3981 MTIAWLWNLWPFRVDELRGSKQLVSKLNLPEDTKQFVLVLRDPQTQSLIYILSSLNLSERSASDAECLIREIKPDAVLVQAAVSAFSEEEDSLPLPTSSFGVIKRCFLDKIGRDVYESVAGNLVLREIFGTSFHGPLLAAKRAAEDVGSSFLVIESPSSWGDSNSNSSGDDNCGVIDRSSSFRSLVHSLVPQQQQHAASLAPPALKRFSLDKELRVMLARALSGYLDPLLLSGNNGGVSSVLEIQPSTSFETPGFARSIYPLLEDLYEIFGDLPSIGKALAHVQKMLLDVNRGEVLDKRTVSEVYTFRIAVEGLRIALNNKGLRPINRKGGAKSDKVEFSELPADDKLHALFAHAIRSQTEKFTTIVAVVDASALAGIRKYWDTPLPVEVKELVGQLITNSEGKGVMLNHGDKKRLLTDKPMVAVGAGATAVLGASSLTKVVPASTLVKVLSFKTPASLKFGLSQIQKVLAFALGPSKVVAPGVATSGAKTSGIMKVAVSAEKIRAVTHSVIASAEKTSISVMRTAFYEIMRKRKLRPVGFLPWATFAGSIGTCSGLLLYGDGIECAVESLPAAPSIASLGRGIQHLREADEKLIESFSYIRHAFHLPDFPYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPSQIFPTYMHSNRKIQAHQGILLVQPLLEFSKEDMYKICLGGSEDWVEDPTNQSQLYAHNRIRLVLNNLSSYQVMESFESHPYGQQGNFVAKELEKSIEDENSYANHLVPNATVVHFLDVNPE 823
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00219 823 Gene3D HUPs 705 781 IPR014729 -
Cca04g00219 823 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 709 766 - -
Cca04g00219 823 PANTHER TRANSMEMBRANE PROTEIN 3 594 - -
Cca04g00219 823 PANTHER TRANSMEMBRANE PROTEIN 3 594 - -
Cca04g00219 823 Pfam PP-loop family 715 763 IPR011063 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00219 Cca-Chr4 2088208 2093532 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00219 - - gsj:114376884 924.465