Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00209 ATGGCTCCAAACAAGCTCAATTCCCCGGGAAATACAAGTACGTCATGTTCGCAGGCTGAGAATGGTTTTGTCAATTCCTTTTCTCTCTTCCCTGAGAAAGCAGTGCAAGAGCTTCTTCAATCTCCAGTCCAGGGGTCGGATGACCATCTTATAGAGTTCTCTGAAGCTTTAAGAACTGTTGCGAAGGCTCTCAGGCAGGTTGCCGAAGGGAAAGCTTCTGCTCAAGCTGAGGCTGCTGAATGGAAACGTAAATTTGAATTGGAGAGGGCACGGAATCTGAAGTTTGAACATGCAGAGAAATCATGTCTTGACCATCAGGCTGATCTTGATGACACGAGGACAGATAACCCAGCCAAACAACCTACATCATGCAATGAGGCTAATGGGCAATCTGAAAAATGTTGTTCGAGGAATGGTATTTGCTCCCATGAGGTTCTTAGGGATGGAGCACCTGATTCCGATTCCAAGATGATCAAAAAGGCTTCATTTAAACTTTCATGGTTCTGCAAAGGTGAGCAAAGTGATCAGTACAAACATGACATTGTCTCTTTTGAAAGAGGAAATATAACCACTGCAGAGCGCAGTAGTAAGCAGATCTCTTTGAAGTGGGAGTCATGCCCACAGACAGTGCTCATATTGACCAAACCAAATTCAGTTTCAGTTCAAATTTTGTGTGCTGAAATGATTAGATGGTTGAGGCAGCGAAAGAAACTACACATCTATGTGGAACCACGTGTCAGGGTGGAGCTTTTGACAGAATCATCATACTTTAATTTTGTAGAAACTTGGAATAATGATAAGGAAGTTTTGATGCTGCACGATAAAGTTGACCTCGTGGTAACTCTTGGTGGAGATGGCACTGTCCTATGGGCAGCATCTATGTTCAAAGGGCCAGTCCCTCCTATTGTCCCCTTTTCTTTAGGGTCTCTGGGCTTTATGACCCCTTTCTATAGTGAACATTACAAAGAATGCCTTGAATCAATTTTAAAGGGTCCCATTAGTATCACATTACGGCACCGTCTGCTATGTCATGTTATACGAGATGCAGCTAAAAATGAATATGAAACTGAAGAACCAATGCTTGTGCTAAATGAGGTTACAATTGATCGTGGAATATCTTCTTTCCTCACAAATTTGGAATGCTACTGTGACAACTCCTTTGTCACATGTGTGCAAGGGGATGGATTAATCTTATCTACAACATCGGGCAGTACAGCATATTCTTTAGCAGCTGGAGGATCAATGGTCCATCCGCAGGTTCCAGGTATTTTATTCACACCAATTTGCCCACATTCTCTATCATTTAGGCCATTGATATTTCCGGAACATGTGACATTGCGGGTGCAAGTACCATTCAACAGCAGAAGCCCTGCATGGGCATCATTTGATGGCAAGGACAGGAAGCAGTTAGCACCTGGAGATGCACTTGTCTGTAGCATTGCTCCATGGCCTGTTCCCACAGCTTGTTTGGTTGATTCTACCAATGACTTCTTGCGCAGTATTCATGAAGGCCTCCATTGGAATTTGAGAAAGACACAATCATTTGATGGCCCCCGGGATACATGA 1566 0.4349 MAPNKLNSPGNTSTSCSQAENGFVNSFSLFPEKAVQELLQSPVQGSDDHLIEFSEALRTVAKALRQVAEGKASAQAEAAEWKRKFELERARNLKFEHAEKSCLDHQADLDDTRTDNPAKQPTSCNEANGQSEKCCSRNGICSHEVLRDGAPDSDSKMIKKASFKLSWFCKGEQSDQYKHDIVSFERGNITTAERSSKQISLKWESCPQTVLILTKPNSVSVQILCAEMIRWLRQRKKLHIYVEPRVRVELLTESSYFNFVETWNNDKEVLMLHDKVDLVVTLGGDGTVLWAASMFKGPVPPIVPFSLGSLGFMTPFYSEHYKECLESILKGPISITLRHRLLCHVIRDAAKNEYETEEPMLVLNEVTIDRGISSFLTNLECYCDNSFVTCVQGDGLILSTTSGSTAYSLAAGGSMVHPQVPGILFTPICPHSLSFRPLIFPEHVTLRVQVPFNSRSPAWASFDGKDRKQLAPGDALVCSIAPWPVPTACLVDSTNDFLRSIHEGLHWNLRKTQSFDGPRDT 521
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00209 521 Pfam ATP-NAD kinase N-terminal domain 210 331 IPR002504 GO:0003951|GO:0006741
Cca04g00209 521 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 16 - -
Cca04g00209 521 SUPERFAMILY NAD kinase/diacylglycerol kinase-like 209 513 IPR016064 -
Cca04g00209 521 Gene3D - 197 508 IPR017438 -
Cca04g00209 521 Hamap NAD kinase [nadK]. 208 507 IPR002504 GO:0003951|GO:0006741
Cca04g00209 521 PANTHER NAD KINASE 1-RELATED 1 521 - -
Cca04g00209 521 PANTHER NAD KINASE 1 521 - -
Cca04g00209 521 MobiDBLite consensus disorder prediction 108 128 - -
Cca04g00209 521 Pfam ATP-NAD kinase C-terminal domain 363 476 - -
Cca04g00209 521 Gene3D - 340 483 IPR017437 GO:0003951|GO:0019674
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00209 Cca-Chr4 1960960 1969458 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00209 K00858 - gmx:100806276 984.941