Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00206 ATGAGTAACAACGGTGCAGGGAAATTGGTGTGTGTCACCGGAGCTGCCGGTTACATTGCTTCATGGATTGTCAAGTTCCTCCTTCAACGTGGTTACACTGTCAGGGCTACTGTTCGAAATCCAAATGATCATAAAAAGGTGGAACATTTGCTTAAGCTTGAAGGTGCAAAGGAGAGACTACACTTGTTTAAAGCAGATCTTTTGGCTGAAAATTCCTTTGACTCTATTGTTGAGGGTTGCGATGGTGTCTTTCATACTGCTTCTCCCTTTATTGTCAACATCAAAGACCCACAGGCAGAACTAATTGACCCAGCAGTGAATGGAACTCTTAATGTTCTTAAATCATGTGTAAAATCCTCATCTGTGAAACGAGTCATCTTAACATCTTCTGTGGCTGCAGTTGCATACAACGAAAGACCTAAAAGTCCCGAAGTTGTAGTTGATGAAACCTGGTTTTCAAATCCAGATTACTGTAGGGAATTAAAGCTATGGTATATGCTTTCAAAGACTTTGGCTGAGGATGCCGCATTGAAATTCGCAAAAGAAAACAACCTTGACTTGGTTGCTGTTAACCCAGCAATGGTTGCGGGGCCACTTTTGCAAGCAGAGCTTAACACAAGTGCTGCTGCAATTTTAAACTTAATAAATGGTTCAGAAACTTTTCCAAATGATACTTATGGATGGATCAATGTGAAGGATGTTGCAAATGCCCATATTCAGGCATATGAAATTGCTTCAGCTAGTGGAAGATACTGTTTAGCCGAGAGAGTGGCACACTTCTCTGAACTCGCCAATATTTTACGTGATTTGTACCCGACATTTCAAATTCCAGAAAAGTCTGCAGATGATAAGCCTTATGTACCAACATTTCAAGTTTCTAAAGAAAAGGCAAAAAGTTTGGGGATTGAATTTATTCCTTTGGAAGTTACCCTTAAAGAGACTGCGGAAAGTTTAAAAGAAAAGAATTTTGCCAACTTTTAA 981 0.3976 MSNNGAGKLVCVTGAAGYIASWIVKFLLQRGYTVRATVRNPNDHKKVEHLLKLEGAKERLHLFKADLLAENSFDSIVEGCDGVFHTASPFIVNIKDPQAELIDPAVNGTLNVLKSCVKSSSVKRVILTSSVAAVAYNERPKSPEVVVDETWFSNPDYCRELKLWYMLSKTLAEDAALKFAKENNLDLVAVNPAMVAGPLLQAELNTSAAAILNLINGSETFPNDTYGWINVKDVANAHIQAYEIASASGRYCLAERVAHFSELANILRDLYPTFQIPEKSADDKPYVPTFQVSKEKAKSLGIEFIPLEVTLKETAESLKEKNFANF 326
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00206 326 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 3 323 - -
Cca04g00206 326 PANTHER CINNAMYL ALCOHOL DEHYDROGENASE 3 323 - -
Cca04g00206 326 Pfam NAD dependent epimerase/dehydratase family 10 243 IPR001509 -
Cca04g00206 326 Gene3D - 8 326 - -
Cca04g00206 326 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 5 319 IPR036291 -
Cca04g00206 326 CDD FR_SDR_e 10 301 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00206 Cca-Chr4 1917539 1920995 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00206 1 326 Miscellaneous Gene Families AT5G19440 70.552 0.0 503
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00206 - - gmx:100809326 579.711