Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00200 aTGGAGGATGCATCGGCTTCGAAGTTCATCCCGCACCAAATCGGAGGTGTCCAAAACGACGCGCTTCGATTCGGTCTCCATGGAGTCAAGAGCGACATCGTTGGTTCTCACCCTCTCCAATCTTCCCTCCAATCTACAAGGAGAATGGAAGAAGCGATGAAGAGGCAATGCAAAGTCAACTTGTATGGAACTGCTTTTCCTCTCAAGGAGGAACTTGACAGGCAAATATTGTCACGATTCCAGCGGCCTCCTGGGCCAATTCCATCTTCGATGCTGGGTTTGGAGACTGTCACGGGAAGTCTTGATCACTTCGGTTTTGAGGATTGTCTGAATGACCCCCGTGAATCAGAGACATTCCGGCCATTGGATATGCATCATGGGATGGAAGTTCGCCTTGGTCTATCTAAGGGACCAGTGTACCCAAGTATTATATAA 435 0.4897 MEDASASKFIPHQIGGVQNDALRFGLHGVKSDIVGSHPLQSSLQSTRRMEEAMKRQCKVNLYGTAFPLKEELDRQILSRFQRPPGPIPSSMLGLETVTGSLDHFGFEDCLNDPRESETFRPLDMHHGMEVRLGLSKGPVYPSII 144
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00200 144 Pfam Proteasome maturation factor UMP1 17 132 IPR008012 GO:0043248
Cca04g00200 144 PANTHER BNAA07G25120D PROTEIN 6 144 - -
Cca04g00200 144 PANTHER PROTEASOME MATURATION PROTEIN UMP1 6 144 IPR008012 GO:0043248
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00200 Cca-Chr4 1860125 1862335 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00200 K11599 - gmx:100500555 292.352