Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00199 ATGGAGAGAAAGACGCTTCTCGTCTGTTGCCTTGTTGCATTCTTGGGCCTGTTGGCGGCTGCAACTAGCTTCGCTGCTGAAGCCACAAGGATTAAGGGTTCTCAAGTTCATTTTGTTACACCGAATCAGTGCACGTATCCTCGAAGTCCAGCTCTATCTCTTGGTTTAACTGCAGCACTGGCTCTTATGCTATCTCAAATAGTCATAAATGTTGCAACTGGGTGTGTTTGTTGCAGAAAAAGTTCTCAAATTCCAGATTCCAATTGGAAGGTGGCACTGGTCTGCTTTGTTTTGTCCTGGTTCACATTTGTAATCGCTTTTCTGCTGTTGTTAACCGGCGCTGCGCTGAATGATCAACGTGGTGAAGAGAGTGTGTACTTCGGCTACTACTACTGCTATGTTGTGAAACCTGGAGTTTTTGCAGGGGGTGCAATTTTATCCATTGCAAGTGTTGCATTTGGAATTGTTTATTACATTTCCTTAACCAAAGGAAAGAATGGTGGCCAATACCCATATCCTAATCAAGGGGTCATAGCCATGGCACAACCACAAATTCCACCATCATCGGAGTCTGGTCAAGAACCTGTCTTTGTGCATGAAGACACATACATGAGGCGACAATTCACATGA 630 0.4444 MERKTLLVCCLVAFLGLLAAATSFAAEATRIKGSQVHFVTPNQCTYPRSPALSLGLTAALALMLSQIVINVATGCVCCRKSSQIPDSNWKVALVCFVLSWFTFVIAFLLLLTGAALNDQRGEESVYFGYYYCYVVKPGVFAGGAILSIASVAFGIVYYISLTKGKNGGQYPYPNQGVIAMAQPQIPPSSESGQEPVFVHEDTYMRRQFT 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00199 209 Pfam Protein of unknown function (DUF1218) 58 152 IPR009606 -
Cca04g00199 209 PANTHER OS07G0462200 PROTEIN-RELATED 1 191 - -
Cca04g00199 209 PANTHER PROTEIN, PUTATIVE (DUF1218)-RELATED 1 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00199 Cca-Chr4 1852849 1856075 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00199 - - gmx:100787046 347.051
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00199 04 1852849 1856075 Cca04g00199 04 1852849 1856075 ECH