Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00198 ATGAAGAATTGGTCGAAGGAGGGTTGGAGGTGGCTGTCAAAGATTGCTGTTGATTTTTCCGGAAACAATGAATGTAATCCCGTGATCGTAACTCGTGGATTCGGAAGTGCGGTTAGCGTCGATCCTCATTATCAGTTGACGAGGGATTTCCTCGCAAAGCTTTGGGTTGATGATAAAAAAATGAGAAACCTCAGAGGGAGGAAATTAGGTAAACACGGTGACCCGAGGTGGTTTTCCGCTTCGTCTGGTGTCGCCAGGAGCGGTAAACGACGTGCCGTTTTGAAGCAACCCCCTATCAGTCAATCTGTCACTGACTTTTTCGATCCACACTCTCCCCAAGAGGCCAAGGTAGCACCGCTGCTTGCCAGGTCCAACTTGCTAATTACCAGAGATATCGAGTGGGCAAATCTTGTATTAGGATTTGAACAGGAAAATCGTTATGCCATTGTAGATGCGTGCTACCCTCAGTCGCCTGTAGGTTTTATTCGTGAACAGAGCAACGTCATTACCAGACAGTTACTCCGTCTAAGGCGGCCTTTTGTTGCATACATAACTGATGCCTTGGGGAATGAGCTCTTTAGGGTTCGCAGACCCTTTTGGTGGATAACAAGCTCAATTTTTGCAGAAATTGATGGTAAGGAAGTTGGAGTAGTTCACAGGCGATGGCATCTCTGGAGGAGAATCTACGATTTGTACCTGGGGAATAAGCAATTTGCTGTGGTAGAGAATCCTGGCTTATGGAATTGGACATTCACATTGAAAGATATTAATGGTGAGGTGCTTGCTCAAATAGATCGTGATTGGAGGGGTTTTGGCTTTGAGATTTTGACTGATGCTGGTCAGTATGTGATTCGATTTGGGTGTTCTGATCCCAGCTCCAAGATTGGCCTTGCTTCTGCAATTGAAGACCTGGAAGTCAATCGCTCACTGACACTTGCGGAGAGAGCTGTAACCGTAGCTCTTGCTATATCACTAGATAACGACTACTTCTCAAGAGTCAAGACACGGAGGCTGGGGACTACCCTTCCTTGTTGCCGAAGAGTAAAATTGATTTGA 1056 0.4612 MKNWSKEGWRWLSKIAVDFSGNNECNPVIVTRGFGSAVSVDPHYQLTRDFLAKLWVDDKKMRNLRGRKLGKHGDPRWFSASSGVARSGKRRAVLKQPPISQSVTDFFDPHSPQEAKVAPLLARSNLLITRDIEWANLVLGFEQENRYAIVDACYPQSPVGFIREQSNVITRQLLRLRRPFVAYITDALGNELFRVRRPFWWITSSIFAEIDGKEVGVVHRRWHLWRRIYDLYLGNKQFAVVENPGLWNWTFTLKDINGEVLAQIDRDWRGFGFEILTDAGQYVIRFGCSDPSSKIGLASAIEDLEVNRSLTLAERAVTVALAISLDNDYFSRVKTRRLGTTLPCCRRVKLI 351
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00198 351 Pfam Scramblase 109 332 IPR005552 GO:0017121|GO:0017128
Cca04g00198 351 PANTHER PHOSPHOLIPID SCRAMBLASE 87 334 - -
Cca04g00198 351 PANTHER PHOSPHOLIPID SCRAMBLASE-RELATED 87 334 IPR005552 GO:0017121|GO:0017128
Cca04g00198 351 SUPERFAMILY Tubby C-terminal domain-like 183 284 IPR025659 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00198 - - gmx:100784576 578.941
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00198 04 1844708 1850339 Cca04g00198 04 1844708 1850339 ECH