Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00196 ATGGATTTCCACGCCCTCTCAAGGAAGCAGCTCCAGGCTCTCTGCAAGAAGAACAAGATTCCTGCCAACATCACCAATGTAGCCATGGCTGACGCTCTCGTTGCTCTCCACCAGGTTGAAGGATTGGATGAAATTTTGAATCCAATAGAGGGTGATGTTGGAACCCCAAGTGTTCAGCAGCGTACGGCTGCTAGAGCCTCCACTCAAAGGAAAGCAGCGAGAGAGGAAGCAGAGAAGGCCTCGAGGCCTAATCGCGGCGGGGCTAGAGCTGAAGGAGTTGTTGAGCAAGAGAACAAAGATGGCAATGTGATTAATGTCACTGTCACTGTCACTCCTGCTCCCAGCAGGAGAAAGGCTACTGCGGTTTCCACTCGCAGAAAGAAAGAAGTTGAGATTGTAGAAGAAGACGCTGATGCCGATAAGAATGAGGTTCAGGAAAAGCTGAAGCCATCAGATTTGCCTAAAACACCTGCCGCAGCTCCCATGAGTAGGGCAAGAGGTGCTGGCCGGTCGGTTTGCACCGCCGGTGGTACTTCAATGCAGAAGGCATATAACACGAGGAGATCGGTTAGGTTGTTGGAGAAGGACTTGTCTAAGATGAGCTTGGTGGACTCTGGACTTGTCAAGATTGATGATGATGCTTCTCAAGAATTCAGTAATGTCTCTCAGCAATTAGAAGACTCGTTTGAGGCTGAAAAGGGGTCTAGTTTGCAGACGGCATCAACTGTGGTTTCGGAGGATACCCAGGAAGTGGAAGTTTGCTCCATGGAAAATAAGTCTGAGTATGAATGCCAATCGCATGATTCAGGTTCAGATGTGAAGATAGTTTCTGTGGAAGAGAATGATATGGTGGTTGAACCACTTGATTCAGAGGAAGCTGAACCAGAGAAAGTCAATTGCTTGGAGTTGGAGGCTGAACCACATGGTTCTGATGAAGCAGGATCTGAATCGCTCCCTCTACTTGAAGGATCTTGTGATTCTTCTGAAGTAGAAATTGAAAATAAGGAATGCTTTCGAGCCAGACAAGACACTTTGCCTATTGACGAAGTTGCTATTCAGGAGGGTACTGGCCAAGATATGGATACCGAGACTGTTGTGGTTCCAGATAATGTTACTGAACCAGATGTTGCCTGCTCGCTTCCTATGTTAGCTGAGTGCAAAATGAATGTTCAAGTCAGTAATGAGGGTAATGATAAAGAAGATAGGAGTGATGATCAAGATGTTGCTGATCAAGATTTTAACTATGCTTCAGCGGGCCTACAGGAATTTGATGAGTTCAAAGTGGATGATCAAGTCAGCAATGAGGGTGAAGATAAAAAAGATAAGAACAATGAGCCACAAAAAGAGTCTGAACCACAAGATTCAAATTTGAAACTGGAAGGAAGTTCTAATACATATGACAATTCCGAGGATGAAGGATCTGAAGTGACATCTGTACTTGAGGAATCTAGTGATTCTTCTCAGTCTGAATTAGAAATAGAAAATAAGGAAAACATTGGTGTCATGCAAGACATTTTTCCTTCTGAGGCATCTGAAGATACTCATATGAAGGTTCCTGTCCAAGATGCTGCAACTTTGACTGTTGGGGTGCCGGATGGTGTTGAAGGCAACCAAGACATTTCGCCTTTTGAGGCATCTGATGATGCCCAGGTTATTCACAAAGATGCTGCAACTTTGACTGTTGTGGTGCCTGATGATGTTTCTGATCAAGACATGTCACCTGTTAATGAGGCTCCAGCAAGCATAAAGGAATCTGTGGAGTTCAACACTGAAGAAGATATAGCTGCTGATGGCAATTACATGACAGAAGCTATCTTGGAAGCTGACGGAAAAGATATCATGGAAGTTAAAAATGTCTCTTCTGAGAATTTGGAAGCTGAGGCACAAGCTGAAGAATATGTGGAGCCCGTTGCAGGAGTCCACGTTATGTTGGACGCTCTTAATGCATTTTCAAGTGGTTTGGATGGAGAAGCAGAGGACCATAAGAATACTTCTAAGAACCTGGAAGCTGAAGAATCTGAGGAACCTGTCGCAGTAGAGGACATTGTGTTGGAGGCTGATAATGCAAGTATCCTAAATGGTGTGCTGAGTTGCGAATCCAACACACTGGTTGATGGGGATGTTGTTTCAGAAGACACTACCATTCCAAAACAGGAGCCTAGTGAGACTATGACAGAAGGCTCTATCCATGAGCAGAAGAGTACTGATATTTCAGTTCAATCAGTTGTTTCTGACCAATTGAAGGGAGAAGTTCACAACACCAACGTGATGAAGGAAAACATGAACTCTGATGAACTAAAGACTAAAAGTATCGGCCAACTGAGGAGGTTGCTGAAGCAGTTAACTCTAGATGAAAAAAATAACAGCAAGACTAATGCTGTTAAGGAAGTGGAGAAGAAAAGAACTGCACTGCAGGTACTACCACAGAATGGAGCTCAGATTGATGGCTGA 2451 0.4431 MDFHALSRKQLQALCKKNKIPANITNVAMADALVALHQVEGLDEILNPIEGDVGTPSVQQRTAARASTQRKAAREEAEKASRPNRGGARAEGVVEQENKDGNVINVTVTVTPAPSRRKATAVSTRRKKEVEIVEEDADADKNEVQEKLKPSDLPKTPAAAPMSRARGAGRSVCTAGGTSMQKAYNTRRSVRLLEKDLSKMSLVDSGLVKIDDDASQEFSNVSQQLEDSFEAEKGSSLQTASTVVSEDTQEVEVCSMENKSEYECQSHDSGSDVKIVSVEENDMVVEPLDSEEAEPEKVNCLELEAEPHGSDEAGSESLPLLEGSCDSSEVEIENKECFRARQDTLPIDEVAIQEGTGQDMDTETVVVPDNVTEPDVACSLPMLAECKMNVQVSNEGNDKEDRSDDQDVADQDFNYASAGLQEFDEFKVDDQVSNEGEDKKDKNNEPQKESEPQDSNLKLEGSSNTYDNSEDEGSEVTSVLEESSDSSQSELEIENKENIGVMQDIFPSEASEDTHMKVPVQDAATLTVGVPDGVEGNQDISPFEASDDAQVIHKDAATLTVVVPDDVSDQDMSPVNEAPASIKESVEFNTEEDIAADGNYMTEAILEADGKDIMEVKNVSSENLEAEAQAEEYVEPVAGVHVMLDALNAFSSGLDGEAEDHKNTSKNLEAEESEEPVAVEDIVLEADNASILNGVLSCESNTLVDGDVVSEDTTIPKQEPSETMTEGSIHEQKSTDISVQSVVSDQLKGEVHNTNVMKENMNSDELKTKSIGQLRRLLKQLTLDEKNNSKTNAVKEVEKKRTALQVLPQNGAQIDG 816
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00196 816 MobiDBLite consensus disorder prediction 53 67 - -
Cca04g00196 816 PANTHER ASPARTIC/GLUTAMIC ACID-RICH PROTEIN 1 812 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 456 486 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 307 326 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 423 455 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 136 150 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 655 673 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 136 180 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 394 409 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 68 85 - -
Cca04g00196 816 PANTHER ASPARTIC/GLUTAMIC ACID-RICH PROTEIN 1 812 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 51 93 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 654 675 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 219 244 - -
Cca04g00196 816 MobiDBLite consensus disorder prediction 389 502 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00196 - - ccaj:109798299 1523.06
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00196 04 1827278 1830699 Cca04g00196 04 1827278 1830699 ECH