Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00189 ATGGCGTCGAGTGTTTTGAGGAACCTGATGAGATTCTCTTCATCGAGGAACACGAGCACCAGAAGTTTCAGCCTCGTAACCTCTCAAGTCAGCAACCACACCGCCAAGTGGATGCAGGATACAAGCAAGAAATCGCCAATGGAGCTGATTAATGAAGTTCCTCCGATTAAGGTTGAAGGCAGAATAGTTGCTTGTGAAGGAGATACCAATCCTGCTCTTGGACACCCGATTGAATTTATATGCCTTGACTTGGCCGAGCCAGCTATTTGCAAATATTGTGGCCTTCGGTATGTTCAGGATCATCACCATTAG 312 0.4647 MASSVLRNLMRFSSSRNTSTRSFSLVTSQVSNHTAKWMQDTSKKSPMELINEVPPIKVEGRIVACEGDTNPALGHPIEFICLDLAEPAICKYCGLRYVQDHHH 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00189 103 Pfam Zinc-finger domain 60 97 IPR019401 -
Cca04g00189 103 PANTHER NADH-UBIQUINONE OXIDOREDUCTASE 13 KD-A SUBUNIT 18 103 - -
Cca04g00189 103 Gene3D q5lls5 like domains 49 99 - -
Cca04g00189 103 PANTHER BNAC04G49950D PROTEIN 18 103 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00189 K03939 - gmx:100305499 194.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00189 04 1743654 1746270 Cca04g00189 04 1743654 1746270 ECH