Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00177 ATGAATTCTCTGATCGCAAGCACTCGATTGGAACACTCTTCTACTCTGCTTCTCAGATTCAGACTGAAACAGAAACAGAAACGGAAACAAAGCCTTTCCCATCATTTTCTCTTCAAATTGAACAACTCAGCTCCCATGCTTATTGCATGTTGCTCCTCTGCTCCATCTCCATCACCCAACCCTTCAGACCAAACCCTTCACACCCAAATCACAATCCCCAAAACCCCTTCCTTCCTTTCTCCCATCCCCAAGCTTAGTTTCACTGACCAAGCTTTCTTTCTCCTCGCATTCATCGCCTCTACGACCTCTGTGGCGTTCACTAGCTTTGTTTTTGCTGCCGTTCCCACACTCTTTGCAATGAGAAATGCTGCAATATCCCTTTCCAAGCTGGCAGATACAGCTCGTGAGGAGCTCCCTAGTACCATGGCTGCTATTAGGCTTTCGGGGATGGAGATAAGTGATCTAACTCTAGAACTAAGCGATCTAAGCCAGGAAATAGCAGATGGTGTCAACAAGTCAGCTCAAGCTTTGCAAGCAGCAGAAGCTGGAATCCGACAGATTGGTTCAATGGCACAACAACAAACCGTATCCATGATTCATGAGAGGGCAAGTTTGCCCATAATTTCTTTGCAACCTGCTGTTGCTGGAGCAGCTAGAAAGACTTCTAGAGCAGTTGGCCGAGCCACAAAGAGCTTGTTTAACATCATTTCAGGAAGGCAAGACACAGCAGAATATGATGATGATGCAACATACATTATTGTGAGGAAGAGTTTTGTGGGAGGAAGATGGAGAAGGAGAAGCAATCGGAAAATTCAAAGGTGTGTAAAAGGTGCAAGCAAAGCTATAACCCCGCTTCCAACACTTCAACCTCTTGCCGTTTCCACACTTCCTTCTTCGTTTGTCGCCGTCACGACGATCAAAAGAGGTACTATGAATTGGGTCCGGATGATCCACCTTATGCTGCCAAGTTCTATGACTGTTGTGGGGCTGAAGACCCTGAAGCTTCTGGCTGCACAACCAACTTTCATGTCTCTTATGACGAAGACTGATGTAAAATCTCACTCCTATTACTTACTACTTAGTATTGAACAATCTACTATTATACTTGTCTCACTTTTACCATTATATATGATTTCCAGATTCTTCATCTATACCTTGTTATGCACAAACTGA 1173 0.4433 MNSLIASTRLEHSSTLLLRFRLKQKQKRKQSLSHHFLFKLNNSAPMLIACCSSAPSPSPNPSDQTLHTQITIPKTPSFLSPIPKLSFTDQAFFLLAFIASTTSVAFTSFVFAAVPTLFAMRNAAISLSKLADTAREELPSTMAAIRLSGMEISDLTLELSDLSQEIADGVNKSAQALQAAEAGIRQIGSMAQQQTVSMIHERASLPIISLQPAVAGAARKTSRAVGRATKSLFNIISGRQDTAEYDDDATYIIVRKSFVGGRWRRRSNRKIQRCVKGASKAITPLPTLQPLAVSTLPSSFVAVTTIKRGTMNWVRMIHLMLPSSMTVVGLKTLKLLAAQPTFMSLMTKTDVKSHSYYLLLSIEQSTIILVSLLPLYMISRFFIYTLLCTN 390
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00177 390 PANTHER CHITINASE-LIKE PROTEIN 61 249 - -
Cca04g00177 390 PANTHER CHITINASE-LIKE PROTEIN 61 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00177 Cca-Chr4 1622366 1630446 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00177 - - gmx:100809293 343.969