Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00168 ATGGTAGCCGAGAGAGAGggtaacggtaacggtaacggtaacggtaaTGGCATCGGAGAAGGATCACTCATATTCACCTACGGAACCTTGAAGAGAGGCTTCTCCAACCACAACCTTCTCCAAGACCTCATCCGCGCCGGCGACGCCTCCTTCGTCGGAACCTACCGCACCGCCGCCAACTACCCCCTCGTCTGCGGGCCCTACCGTGTCCCCTTCTTGATCAACCTTATCGGGTCGGGTCGCAGGGTCCGCGGCGAGCTCTACTCCGTCTCCACGCGCGCCCTCGCGCGTATGGACGAACTCGAGGGCACCTCTCGCGCCCACTACGAGCGCCTCCCCATCCAGGTTGTCCCCGCCGCCGATCGCgacgaggaggcggaggaggatgaggatgaggaggaggacgtggtggtggaggGGCTAACGTGCGCTGAGGCGTATTTTGCGCACCGGAACTACGCGTTGGAGATGTGGAAGAAGAACGGGAAGGAAGGGTTGCGGTGTTACACGGCGAAGGAAGTTATCGGTTATGTGAAGCGCAAGGATAGGCCTCAGCATTTGACCTTCCTCGATCACATTCGCTTCTTCCTTTCCTCTTAG 600 0.5183 MVAEREGNGNGNGNGNGIGEGSLIFTYGTLKRGFSNHNLLQDLIRAGDASFVGTYRTAANYPLVCGPYRVPFLINLIGSGRRVRGELYSVSTRALARMDELEGTSRAHYERLPIQVVPAADRDEEAEEDEDEEEDVVVEGLTCAEAYFAHRNYALEMWKKNGKEGLRCYTAKEVIGYVKRKDRPQHLTFLDHIRFFLSS 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00168 199 Pfam Gamma-glutamyl cyclotransferase, AIG2-like 24 150 IPR009288 -
Cca04g00168 199 PANTHER BNACNNG06060D PROTEIN 17 199 - -
Cca04g00168 199 PANTHER TROPONIN C-AKIN-1 PROTEIN 17 199 IPR039126 GO:0061929
Cca04g00168 199 Gene3D - 22 183 - -
Cca04g00168 199 CDD GGCT_like 24 118 IPR013024 -
Cca04g00168 199 SUPERFAMILY Gamma-glutamyl cyclotransferase-like 23 151 IPR036568 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00168 Cca-Chr4 1554474 1555706 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00168 K19761 - gmx:100802936 295.434
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00168 04 1554474 1555706 Cca04g00168 04 1554474 1555706 ECH