Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00163 ATGGGTTGGGTAAGGGGAATGTTGGAAGGGGCGTCGGTGGTGGGATGCTTGTGCTTGCTGGGTTGGGCGGGTCTCTGGTTCTTGAACCGTCGTCTCTACAAAGAGTACGAAGAGAAACGTGTCCTCGTTCAAATCATCTTCAGCGTCGTTTTCGCCTTCTCCTGCAATCTTCTCCAGCTCGTTCTCTTCGAAATCATTCCCATTCTCTCCAAAGAGGCAAGAGTGGTGAACTGGAAGGTGGACTTGTTCTGCTTGATTCTGTTGCTCGTTTTCCTCCTCCCTTATTACCACTGTTACTTGATGCTCAAAAACAGCGGCATCAGAACCGAGAGGGCTGCTCTTGGTGCAATTCTCTTCTTGCTTGCTTTTCTCTATGCCTTTTGGCGCATGGGCATTCACTTTCCAATGCCCTCCCCTGATAAAGGTTTCTTCACCATGCCTCAACTGGTGAGTAGAATTGGGGTCATTGGTGTTACTGTCATGGCTGTCCTGTCCGGTTTTGGGGCAGTAAACCTCCCGTACAGTTATTTATCACTTTTCATCAGGGAGATTGAGGAAACTGAAATCAAGGCCTTGGAGAGACAGCTAATGCAATCGATTGAGACTTGCATATCAAAGAAAAAGAAAATTATTCTTTGCCAGATGGAGATGGAGCACAAGCAAGGATCTGAAGAGAAGTTAAATGCTAGGTCTCTAATTAAACGAATTGTTGGTACGGTTGTTCGATCCGTGCATGAGGATCAAAAAGAGCAAGATATTAAAGGCTTGGAAGCAGAAGTTCTGGCCTTAGAAGAGCTTTCAAAGCAATTGTTCTTGGAAATCTATGAGCTTCGTCAAGCAAAGGAAGCTGCTGCTTATTCTCGAACTTGGAGAGGACACATGCAGAATCTGCTTGGCTACGCTTGTTCTGTATATTGTGTGTATAAAATGATCAAGTCATTGCAAAGTGTTGTTTTCAAACAGGATGGTTCAGTTGATCCTGTGACAAGGATAATAAGTATATTCCTTCAGTTCTTTGATATAGGAATAAATGCAGCCTTATTATCACAGTACATTTCCTTGCTATTCATCGGAATGCTGGTTGTGATATCAGTGCGTGGATTCTTAACAAATCTGATGAAGTTCTTTTTTGCTGTTTCAAGAGTTGGAAGTGGATCTTCAAGCAATGTAGTTCTGTTTTTGTCTGAGATAATGGGAATGTATTTTGTATCTTCTATTCTTTTAATCAGGAAAAGCTTAGCAACTGAATACAGGATTATTATAACTGAGGTGTTGGGTGGTGATATTCAGTTTGACTTTTATCACCGATGGTTTGATGCAATTTTTGTGGCTAGTGCATTCCTTTCACTGCTTTTACTTTCTGCGCATTATACATCTCGCCAAATTGACAAACATCCAATTGATTAA 1407 0.42 MGWVRGMLEGASVVGCLCLLGWAGLWFLNRRLYKEYEEKRVLVQIIFSVVFAFSCNLLQLVLFEIIPILSKEARVVNWKVDLFCLILLLVFLLPYYHCYLMLKNSGIRTERAALGAILFLLAFLYAFWRMGIHFPMPSPDKGFFTMPQLVSRIGVIGVTVMAVLSGFGAVNLPYSYLSLFIREIEETEIKALERQLMQSIETCISKKKKIILCQMEMEHKQGSEEKLNARSLIKRIVGTVVRSVHEDQKEQDIKGLEAEVLALEELSKQLFLEIYELRQAKEAAAYSRTWRGHMQNLLGYACSVYCVYKMIKSLQSVVFKQDGSVDPVTRIISIFLQFFDIGINAALLSQYISLLFIGMLVVISVRGFLTNLMKFFFAVSRVGSGSSSNVVLFLSEIMGMYFVSSILLIRKSLATEYRIIITEVLGGDIQFDFYHRWFDAIFVASAFLSLLLLSAHYTSRQIDKHPID 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00163 468 Pfam Abscisic acid G-protein coupled receptor 286 456 IPR025969 -
Cca04g00163 468 Pfam The Golgi pH Regulator (GPHR) Family N-terminal 143 209 IPR022535 GO:0016020
Cca04g00163 468 PANTHER GPCR-TYPE G PROTEIN 2 1 468 - -
Cca04g00163 468 PANTHER G-PROTEIN COUPLED RECEPTOR 89-RELATED 1 468 IPR015672 -
Cca04g00163 468 Coils Coil 182 202 - -
Cca04g00163 468 Coils Coil 246 273 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00163 - - gmx:100814132 810.831
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00163 04 1504901 1514883 Cca04g00163 04 1504901 1514883 ECH