Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00157 ATGGCATTGGAGCAGTACGGGAAGGAGAAAGAGAAACTGAAAAAGGGTATCGCCGAGTTTTACGACGACTCGTCTCGGATGTGGGAGGACATTTGGGGCGACCACATGCACCACGGCTTCTACGACCTCCATTCCACCGTTTCTGTTTCGGATCATCGCGCTGCTCAGATCCGAATGATCCAAGAATCTCTTCATTTTGCCaatgtttctgAGGATAGTACTAAATGGCCCAAGAGCATAGTTGATGTTGGGTGTGGCATAGGGGGAAGTTCTAGATACCTGGCCAAGAAATATGGAGCAACGGCTGTAGGCATTACTCTGAGTCCAGTTCAAGTTCAAAGAGCAAATGCTCTCGCTGCTGCTCAAGGATTGGCTCACAAGGTTTCCTTTCAGGTTGCTGACGCTTTAGAGCAACCATTTCCAGACGGGCAATTTGATCTTGTGTGGTCCATGGAGAGTGGAGAGCATATGCCTGATAAAGAAAAGTTTGTTGGAGAGTTAGCTCGGGTAGCAGCACCAGGTGGAACGATAATAATAGTAACATGGTGCCACAGGGATCTTGGTCCTGGTGAAGAATCCCTACAACCATGGGAGCAAAATCTGTTGAAGAGGATATGCGATGCTTATTACCTACCAGCTTGGTGCTCTACTGCTGATTATGTGAGAATGCTCCAATCCCTCTCACTTCAGGACATTAAGTCAGCAGATTGGTCTCCCTTCGTCGCTCCATTTTGGCCCGCAGTCATACGCTCAGCCTTGACATGGAAGGGTCTCACTTCACTCTTGCGCAACGGACTAAAACCCATAAAAGGAGCTTTAGCTATGCCGTTGATGATAGAAGGATACAAGAAGAATCTGATTAAGTTTGCCATCATTACGTGTCGAAAGCCTGAATAA 897 0.4693 MALEQYGKEKEKLKKGIAEFYDDSSRMWEDIWGDHMHHGFYDLHSTVSVSDHRAAQIRMIQESLHFANVSEDSTKWPKSIVDVGCGIGGSSRYLAKKYGATAVGITLSPVQVQRANALAAAQGLAHKVSFQVADALEQPFPDGQFDLVWSMESGEHMPDKEKFVGELARVAAPGGTIIIVTWCHRDLGPGEESLQPWEQNLLKRICDAYYLPAWCSTADYVRMLQSLSLQDIKSADWSPFVAPFWPAVIRSALTWKGLTSLLRNGLKPIKGALAMPLMIEGYKKNLIKFAIITCRKPE 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00157 298 PANTHER METHYLTRANSFERASE 7 292 - -
Cca04g00157 298 PANTHER CYCLOPROPANE-FATTY-ACYL-PHOSPHOLIPID SYNTHASE 7 292 - -
Cca04g00157 298 ProSiteProfiles SAM-dependent methyltransferase gamma-tocopherol (gTMT)-type family profile. 1 298 IPR025774 GO:0008168|GO:0032259
Cca04g00157 298 CDD AdoMet_MTases 80 182 - -
Cca04g00157 298 Pfam Methyltransferase domain 81 179 IPR013216 GO:0008168
Cca04g00157 298 Gene3D Vaccinia Virus protein VP39 3 295 IPR029063 -
Cca04g00157 298 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 297 IPR029063 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00157 78 236 Acyl Lipid Metabolism Gene Families AT3G18000 30.818 8.07e-18 81.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00157 K05928 - gmx:732543 512.301
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00157 04 1420617 1423352 Cca04g00157 04 1420617 1423352 ECH