Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00155 atggaagaggcaaaggcattgcaacagcaacagcaacagcaacaacagcaacaacaacaacttctgttgcaacaacaacagcagcaacatcaacaacattttctgctctttcagcagttgcaaaagcagcaacatcagcaacagcaagcagccgcCATTTCCCGTTTCCCTTCCAACATTGACGCTCACTTGCGTCCTATCAGACCCCTCAATCTCCAACAAaaccctaaccctaaccctaacccaaatcataatcccaaccctaaccctaaTCCCATCCTCAATTTGCACCAGAACCCTAATTCcaaccacctaccgcagcagccgccgcaacaatcgccgcaacagcaacagcaacagcaTAAGATAATTCGAACGAGCCAGATGGAGCTTCAGATGGCGTACCAAGACGCGTGGCGGGTTTGCCATCCGGACTTCAAGCGACCCTTTTCTTCTCTCGAAGATGCCTGCGAGAGATTATTGCCATATCATGTTGTGGCAGACTATGAAGAAGAAGAGGATGATAGGATACTTGATTCTGACACCACTGGCCAGATGCTTTCACGGTCCCAGCAGTGGGATAATAATATAGCTGCTAAAATTGCTGAATTCACAGCAACTTTTGAGAAACAAGCACTTGCCTTCAACATAATAACCCAAAAGAGAAGTGTGGGGGAGTTCCGGTCCGAGGAGAGATTGATGATTGAGCAGGCACTTCTCCAAGAAGAAAAACGGGCTAATTTTGAATTAAGAGCAGAACTAGAGTCCAGGGAGAAGGCTGGTCGTGAAGCACACGAGGCTAAACTACGGATGGCAGCAATGTTTCAAGCAGAACAGGCTCGTGCAGATTTACAGTCTCATGCTGAAATGATGTCTCGAGTGCCAATGAGAGGGAGTGCACTTGGTTCCCAAGGCAACGACATTGTGATTGGCCATGACATGGGAGAGCAGGATCAGGGAAGTAACCCAGGTGAGATGATTAATGGATGGGGAAACAATGCACAGAGAGATGAGAAGGAGCCATCTGAGGATTTCTTGAATGATGAAGCCGAGAATGGAGACACTGGAACGCAGGATGGCTGGCGTGAAGTTGGTGAATTTGATTTGAATGCTAGGTGA 1119 0.3619 MEEAKALQQQQQQQQQQQQQLLLQQQQQQHQQHFLLFQQLQKQQHQQQQAAAISRFPSNIDAHLRPIRPLNLQQNPNPNPNPNHNPNPNPNPILNLHQNPNSNHLPQQPPQQSPQQQQQQHKIIRTSQMELQMAYQDAWRVCHPDFKRPFSSLEDACERLLPYHVVADYEEEEDDRILDSDTTGQMLSRSQQWDNNIAAKIAEFTATFEKQALAFNIITQKRSVGEFRSEERLMIEQALLQEEKRANFELRAELESREKAGREAHEAKLRMAAMFQAEQARADLQSHAEMMSRVPMRGSALGSQGNDIVIGHDMGEQDQGSNPGEMINGWGNNAQRDEKEPSEDFLNDEAENGDTGTQDGWREVGEFDLNAR 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00155 372 Coils Coil 240 260 - -
Cca04g00155 372 MobiDBLite consensus disorder prediction 90 123 - -
Cca04g00155 372 PANTHER MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION SUBUNIT-LIKE PROTEIN 13 372 - -
Cca04g00155 372 Pfam Conserved region of unknown function on GLTSCR protein 137 249 IPR015671 -
Cca04g00155 372 MobiDBLite consensus disorder prediction 73 89 - -
Cca04g00155 372 PANTHER GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1 13 372 - -
Cca04g00155 372 MobiDBLite consensus disorder prediction 327 372 - -
Cca04g00155 372 Coils Coil 1 29 - -
Cca04g00155 372 MobiDBLite consensus disorder prediction 69 123 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00155 - - gmx:100793492 519.235
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00155 04 1404988 1410249 Cca04g00155 04 1404988 1410249 ECH