Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00154 ATGGCAAGGTCGTTAGTGGGGTCTTTACCCCTTTTTTCTCTTCCATACAACAAAAACAGCATTTCACTAATCACACCCCTCCACTTGTCATCCTCCGCCGCTGCCATGCCTGCTGCCTCCGCCGCTGCCCACCCTTCCTTCGAAATCCTCGGCGGCGCACGCGACCGTTTCCTGCCTGCCCTCTCCCACTTGTCTCGCCCCTACCGCCCTTTCCCCCTCCTCGCCGCCAACCGCCACGTCGAAACCATCTTTGCCGCCTTCTTCCGCTCCGTCCCCGACGTCAGGCTCCGCCGCGAGTGCCTCAGGACGCAGGACGGCGGCGCCGTGGCTCTCGACTGGCCTGGCTTGACCGGAGGTAGTGAGGATGCTTACGTGAGACACATGTTGGTCAGAGCTCGAAGCAATGGATGGCGTGTTGTCGTCTTCAACAGTCGCGGTTGTGGAGATAGCCCTGTTACTACTCCTCAGTTCTATTCGGCTTCATTTTTGGGAGATATGCGTGAGGTTGTTTCTCATGTCACTGGTAGATATCCCGATGCTAATGTATATGCTGCTGGTTGGTCTCTTGGGGCCAACATTCTCGTTCGTTACTTGGGTCAGGAATCGCACAATTGCCCTCTTTCTGGCGCTGTCTCATTGTGTAATCCTTTCAACCTGGTTGTGGCTGATGAGGACTTCCGAAAGGGCTTTAACAATATTTATGATAAGGCCCTTACAAAGGCTCTTTGCAAAATTTTCAAAAAGCATGCTTTACTCTTTGAAGATATTGGAGGTGAATTTAACATTCCACAGGCAGCCAATGCTAAGTCTGTTAGGGAGTTTGATGATGGACTGACTCGTGTTTCTTTTGGATTCATGTCTGTGGATGACTACTACTCTAACTCAAGCAGTTCAGATTCCATAAAACATGTTAAAACCCCTTTGCTTTGCATCCAGGCAGCCAATGATCCGATTGCTCCTAATAGGGGAATTCCTCGTGAAGATATCAAGGAAAATCCAAACTGCTTGTTAATAGTGACACCCAAAGGTGGCCATCTAGGGTGGGTTGCTGGTGAAGCTGCTCCACGAGGCGCCCCTTGGACTGATCCTTTGGTAATAGATTTTATTCAATATTTAGAGAGAGGAGCAGTTAAGGCTCCAGAAACTTCTACCAATCCAGGAAGTAAAGAAGCCTTATACCATCTTGAAGTGTAA 1194 0.4983 MARSLVGSLPLFSLPYNKNSISLITPLHLSSSAAAMPAASAAAHPSFEILGGARDRFLPALSHLSRPYRPFPLLAANRHVETIFAAFFRSVPDVRLRRECLRTQDGGAVALDWPGLTGGSEDAYVRHMLVRARSNGWRVVVFNSRGCGDSPVTTPQFYSASFLGDMREVVSHVTGRYPDANVYAAGWSLGANILVRYLGQESHNCPLSGAVSLCNPFNLVVADEDFRKGFNNIYDKALTKALCKIFKKHALLFEDIGGEFNIPQAANAKSVREFDDGLTRVSFGFMSVDDYYSNSSSSDSIKHVKTPLLCIQAANDPIAPNRGIPREDIKENPNCLLIVTPKGGHLGWVAGEAAPRGAPWTDPLVIDFIQYLERGAVKAPETSTNPGSKEALYHLEV 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00154 397 ProSitePatterns Uncharacterized protein family UPF0017 signature. 275 316 IPR000952 -
Cca04g00154 397 Pfam alpha/beta hydrolase fold 114 346 IPR000073 -
Cca04g00154 397 SUPERFAMILY alpha/beta-Hydrolases 97 356 IPR029058 -
Cca04g00154 397 Gene3D alpha/beta hydrolase 100 368 IPR029058 -
Cca04g00154 397 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 114 375 - -
Cca04g00154 397 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 42 113 - -
Cca04g00154 397 PANTHER ALPHA/BETA HYDROLASE FOLD PROTEIN-RELATED 114 375 - -
Cca04g00154 397 PANTHER ABHYDROLASE DOMAIN-CONTAINING PROTEIN 42 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00154 Cca-Chr4 1397154 1400673 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00154 97 379 Miscellaneous Gene Families AT2G03140 32.343 4.76e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00154 - - gmx:100809859 672.544