Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00147 ATGATGCTGGATTTGGGTCCGTTCTCGAATGAGAACTTCGACCCGAAGAAATGGATCAACTCGGCGTGTCAGAGTCGCCACCCTCAGGATTCGTTGGACAAGCACCTCGTGGACATGGAGATGAAGCTCCAGATGGTCTCCGAGGAAATCGCCGCATCGCTCGAGGAGCAGAGCGCCGCCGCTCTCCTCCGCGTCCCCCGCGCCACTCGTGACGTCATCCGCCTCCGCGACGACGCCGTTTCCCTCCGTTCTGCTGTCTCCTCCATCCTCCAGAAGCTCAAGAAGGCAGAGGGGTCATCGGCTGAATCTATTGCTGCTCTTGCCAAAGTTGACGTTGTCAAGCAGAGGATGGAAGCTGCATATGAAACGTTGCAGGATGCTGCGGGATTAACTCAATTGAGTTCGACTGTGGAGGATGTATTTGCCAGTGGAGATCTCCCTCGTGCTGCAGAAACTCTAGCAAACATGAGGCATTGCTTATCCGCAGTTGGGGAGGTTGCTGAATTTGCCAACATAAGAAAGCAACTTGAAGTCTTGGAGGATAGGCTTGACACGATGGTGCAGCCTCGTCTTACAGATGCGTTATCTAATCGCAAGGTTGATGCTGCTCAAGATTTACGGGGAATTCTCATTAGAATTGGAAGGTTTAAGTCTCTGGAATCACAATATATAAAGGTTCATCTGAAACCAATAAAGCAGCTTTGGGAAGATTTTGATTCAAGAGAGCGATCTAGTAGGTTTGCAAATGAGAAGAATGAGATGGAGAGGACATCAAGTGGCAGTGATTTTCAGTCAGTTTCGACTGCAATAATATTCTCCAGTTGGCTACCAAGCTTTTATGATGAACTACTACTTTATCTTGAACAAGAATGGAAATGGTGTATGGTTGCATTTCCGGAAGATTATAAAACTCTTGTCCCAAGGCTACTAAGTGAGACTATGATGTCTATAGGTTCCAGTTTCATATCCCGTATCAACCTTGCCATTGGAGATGCTGTTCCAGAAACAAAAGCACTGGCTAAAGGTTTACTAGATATTTTAGCTGGAGATATGCAAAAGGGTATTAAGATTCAGAGAAAGCATCTGGAAGCCTTGATTGAATTACACAATATGACTGGGACTTTTGCTAGGAATATTCAGCACTTATTTTCTGCCTCTGATGTTCGGGTTTTAATGGATGTGCTGAAAGCTGTGTACTTGCCTTATGAATCGTTTAAACAGAGGTATGGACAAATGGAGCGTGCCATCCTTTCCTCTGAGATTGCAGGAGTAGATTTAAGAGGAGCTGTTATTCGAGGGGTGGGAGCCCAAGGTGTTGAACTTAGTGAAACAGTTCGAAGGATGGAGGAGTCTATTCCCCAAATAATTATACTTCTTGAAGCAGCTGCAGAGAGATGCATTGGCTTCACTGGAGGTTCTGAGGCAGATGAGCTTATTCTTGCCCTTGATGACATAATGCTACAATACATTTCCATTCTGCAAGAAACTCTCAAGTCACTGAGAACTGTCTGTGGTGTGGATTATGGTGGTGATGGTACTGTTAAAAAGGAGATAGAGAAGAAGGATGGAAACCAAAATGCTCGGAGAGTTGATTTGATCTCAAATGAGGAGGAATGGTCCATAGTCCAAGGGGCGTTGCAGATCCTGACAGTTGCAGATAGTTTGACAAGCAGATCTTCTGTATTTGAAGCATCTTTAAGAGCTACTCTTGCTAGATTGAGCACAACTCTATCTTTTTCTGCATTTGGTTCAAGTTTAGACCAAAACCAGACTAAAAATATTAATGTAGATGGGGAACCGTCTTTTGGTGGAAGGGCTGCCTTGGATATGGCAACACTGCGGTTGGTTGATGTGCCTGAGAAGGCCAGGAAACTCTTTAACCTTTTAAATCAGTCCAAAGATCCCCGATTTCATGCACTTCCCCTTGCATCTCAAAGAGTTGCAGCATTTGCAGACACAGTTAATGAACTTGTATACGATGTCCTCATATCTAAAGTACGGCAACGCCTTAGTGATGTGTCCCGTTTGCCAATTTGGTCATCAGTTGAGGAACAAGGAGCCTTTCCCCTCCCCACCTTCAGCGCATATCCACAATCCTATGTCACCAGTGTTGGTGAATATCTTCTTACTTTACCCCAACAATTGGAGCCACTTGCGGAGGGAATTTCTACCAACGAAATCAATGATGAGGCACAGTTCTTTGCAACTGAATGGATGTTCAAGGTTGCAGAGGGCGCAACTGCACTTTACATAGAGCAGTTACGTGGGATTCAGTATATTTCAGATCGTGGAGCACAGCAGCTATCAGTCGATATTGAGTATCTTAGTAACGTGCTTTCTGCTCTGTCAATGCCAATTCCTCCAGTTCTGGCTACATTCCAAAGTTGTCTTTCTACACCAAGAAATCAGCTAAAAGATCTTTTGAAGACAGATCCAGCCAACCAACTTGATCTGCCAACAGCAAACCTTGTCTGTAAGATGCGCCGACTGAATTTGGATTCTTGA 2505 0.4487 MMLDLGPFSNENFDPKKWINSACQSRHPQDSLDKHLVDMEMKLQMVSEEIAASLEEQSAAALLRVPRATRDVIRLRDDAVSLRSAVSSILQKLKKAEGSSAESIAALAKVDVVKQRMEAAYETLQDAAGLTQLSSTVEDVFASGDLPRAAETLANMRHCLSAVGEVAEFANIRKQLEVLEDRLDTMVQPRLTDALSNRKVDAAQDLRGILIRIGRFKSLESQYIKVHLKPIKQLWEDFDSRERSSRFANEKNEMERTSSGSDFQSVSTAIIFSSWLPSFYDELLLYLEQEWKWCMVAFPEDYKTLVPRLLSETMMSIGSSFISRINLAIGDAVPETKALAKGLLDILAGDMQKGIKIQRKHLEALIELHNMTGTFARNIQHLFSASDVRVLMDVLKAVYLPYESFKQRYGQMERAILSSEIAGVDLRGAVIRGVGAQGVELSETVRRMEESIPQIIILLEAAAERCIGFTGGSEADELILALDDIMLQYISILQETLKSLRTVCGVDYGGDGTVKKEIEKKDGNQNARRVDLISNEEEWSIVQGALQILTVADSLTSRSSVFEASLRATLARLSTTLSFSAFGSSLDQNQTKNINVDGEPSFGGRAALDMATLRLVDVPEKARKLFNLLNQSKDPRFHALPLASQRVAAFADTVNELVYDVLISKVRQRLSDVSRLPIWSSVEEQGAFPLPTFSAYPQSYVTSVGEYLLTLPQQLEPLAEGISTNEINDEAQFFATEWMFKVAEGATALYIEQLRGIQYISDRGAQQLSVDIEYLSNVLSALSMPIPPVLATFQSCLSTPRNQLKDLLKTDPANQLDLPTANLVCKMRRLNLDS 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00147 834 Pfam Golgi complex component 7 (COG7) 4 829 IPR019335 GO:0006886|GO:0017119
Cca04g00147 834 PANTHER CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7 1 828 IPR019335 GO:0006886|GO:0017119
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00147 K20294 - gmx:100796129 1507.66
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00147 04 1341671 1348341 Cca04g00147 04 1341671 1348341 ECH