Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00144 ATGGAAGAAAGGAAGCAATCACGCTATGTCAAACTCTCCAAAGATCAGTCACCTCTCGAAGATATCACCCCTGGCGAACTCAACCAACCAATTCAGGTTCCTCAGTTGGATGTTCGCAAGTGCCCTGAATGTAGACAGCCGCTACCTGAAAGCTATTCACCTCCTGCAGATGAACCTTGGACGACTGGGATCTTTGGATGTGCTGAAGACAGAGAAAGCTGCTTGACTGGACTGTTTTGTCCTTGTGTATTATTTGGGCGCAATGTAGAAAGATTGAAGGAAGACACTCCTTGGACTGGGCCATGCATTTGTCATGCCCTTTGTGTTGAAGGTGGCATTTCTCTGGCTGTAGCAACTGTAGCTGCAACTTCCATCTTTCCTGCTGTTGACCCGGGGACTGTATGTCTCATTTTTGAGGGTTTAATGTTTACTTGGTGGATGTGTGGCATTCACACTGGTCAAGTTCGGCAATCATTACAGAAGAAATATCACTTGAAGAATTCACCGTGTAATGCATGCTGTGTGCACTGCTGCTTGCACTGGTGTGCCTTGTGTCAAGAACACAGGGAGATGAAGGGACGGCTCTCAGACAATTTATTTTCAGAAATGACTGTTGTAAACCCTCCTCCCGTTCAAGAGATGAAGTCCACCACCGAGGACAAGGAAATTCCCGAAACCTCTTCACCTAACAATAACGAGCATACTGAAGTGGAGATACAGGCTGTATAA 729 0.4623 MEERKQSRYVKLSKDQSPLEDITPGELNQPIQVPQLDVRKCPECRQPLPESYSPPADEPWTTGIFGCAEDRESCLTGLFCPCVLFGRNVERLKEDTPWTGPCICHALCVEGGISLAVATVAATSIFPAVDPGTVCLIFEGLMFTWWMCGIHTGQVRQSLQKKYHLKNSPCNACCVHCCLHWCALCQEHREMKGRLSDNLFSEMTVVNPPPVQEMKSTTEDKEIPETSSPNNNEHTEVEIQAV 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00144 242 MobiDBLite consensus disorder prediction 1 15 - -
Cca04g00144 242 MobiDBLite consensus disorder prediction 209 242 - -
Cca04g00144 242 PANTHER PLAC8 FAMILY PROTEIN 6 225 - -
Cca04g00144 242 Pfam PLAC8 family 60 190 IPR006461 -
Cca04g00144 242 MobiDBLite consensus disorder prediction 1 28 - -
Cca04g00144 242 MobiDBLite consensus disorder prediction 223 242 - -
Cca04g00144 242 PANTHER DUF614 FAMILY PROTEIN-RELATED 6 225 IPR006461 -
Cca04g00144 242 TIGRFAM A_thal_Cys_rich: uncharacterized Cys-rich domain 59 192 IPR006461 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00144 Cca-Chr4 1328707 1331441 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00144 - - gmx:100499924 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Cca04g00144 04 1328707 1331441 Cca04g00144 04 1328707 1331441 ECH