Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00136 ATGGAATCCTCTAACTGGATTCTGAAACATGTATCCCTTTTACTTGTTTTCTTCCTTAGCCACAGTTGTTCATCTTCTGAGGCTTTCTCTCCCTCGCTTTTGGACCGTGTGGTTACCAACACCACACACCTGCACCGGAATTTCACTGCTGTATCACAATTCAGAACCATTAACAGACAAGTTTTGGATGATTGTTCTGCTTCAAGTCCCTCTCTTAAAGTCAACATCTCCTCAAATTCTAGCTTGTCAGATGAAGAGTTTGTGACTGTCACAGTCTCTGGCGTTTCCGATCCTTCAGATGGCGATTGGGTTGCTATGATCTCACCCTCCAATTCTGATGTGAAAACGTGTCATCTGAACGAGGCATTTTATCTGCAAACTGGTGACACTGATAAACTTCCTCTGCTTTGCCATTACCCTGTCAAGGCACAATACATGAAAAATGATCCAAACTACCTTAGTTGCAAAAACAAAGAATGCAAGACAAACGAAGATGGGAAATGCACTTGCAGTGGTTCAATAAAGTTTCATGTTGTCAACATTAGAAGCGACATTGAGTTCGTGTTCTTGTCTGGTGGATTCCTGAATCCCTGCGTTGTGGGAAGGTCCACCCCTGTGAGTTTTGCCAATCCTAAGAAGCCACTCTATGGACATCTCTCAAGCATAGATTCAACTGGAACATCAATGAGATTGACATGGGTTAGTGGAGACAAGCAGCCTCAGCAAATCCAATATGGAGATGGAAAAACAGCTACTTCAGTAGTCACTACATTTTCACAAAATGATATGTGCACTTCATCAGTTCTGCCAAGTCCTGCTATAGATTTTGGATGGCACGATCCAGGATACATCCATTCAGCCCTAATGACAGGACTTAAGCCTTTAAGCACCTTCTCCTACAGATATGGAAGtaactcggttggttggagtgaacaaatccagttttcaactccacctgctggaggatcagatgagcttaaattcattgtatatggtgatatgggcaagactcctcttgatgcttcggaagaacactacattcagccaggagctctttcagtgattaaagctatagccaatgatgtaaattctagcaacataaattcagtctttcacatcggagacataagctatGCAACAGGTTTTCTAGTAGAATGGGATTTCTTCCTCAGCCTTATCAATCCAGTAGCTTCCAGGGTTTCTTATATGACAGCAATAGGGAACCATGAGAGGGATTACATAAATTCCGGTTCAATATATGTCACTCCTGACTCTGGTGGGGAATGTGGAGTACCTTATGAAACATACTTTCAAATGCCAACTGCAGCAAAGGATAAGCCTTGGTACTCCATTGAACAAGGAAGTGTTCATTTCACAATTATATCAACTGAGCATGACTGGTCAGAAAAATCTGAGCAGTATCAGTGGATGCAAAAGGACATGGCATCAGTTAATCGACAGAAAACTCCTTGGCTAATCTTCATGGGACATAGACAGATGTATTCCTCCTGCCATTCATTGTTATCTACTGAAGAACTATTTAAGGATTCTGTGGAGCCATTGCTACTAGAAAATAAGGTTGACTTGGTTCTTGTTGGCCATGTACATAATTATGAGAGAACTTGTTCCGTGTTTCAAGGTGAATGCAAAGCCATGCCTACAAAAGATAAAAATGGGGTGGACACATATAATGGCAGAAATTACAGTGCCCCTGTGCATGTTGTCATTGGCATGGCTGGCTTCAGCTTAGATAAATTCCCAGACCAAGTGGAAAAATGGAGCCTGAAAAGGATTTCCGAGTATGGTTATTTTAGAGCACATGCTACAAGGAATGATTTAAACTTAGAGTTTGTCGTCTCGGATACAAGAGAAGTTAAGGACAGTTTCCACATTACAAAGTGA 1902 0.368 MESSNWILKHVSLLLVFFLSHSCSSSEAFSPSLLDRVVTNTTHLHRNFTAVSQFRTINRQVLDDCSASSPSLKVNISSNSSLSDEEFVTVTVSGVSDPSDGDWVAMISPSNSDVKTCHLNEAFYLQTGDTDKLPLLCHYPVKAQYMKNDPNYLSCKNKECKTNEDGKCTCSGSIKFHVVNIRSDIEFVFLSGGFLNPCVVGRSTPVSFANPKKPLYGHLSSIDSTGTSMRLTWVSGDKQPQQIQYGDGKTATSVVTTFSQNDMCTSSVLPSPAIDFGWHDPGYIHSALMTGLKPLSTFSYRYGSNSVGWSEQIQFSTPPAGGSDELKFIVYGDMGKTPLDASEEHYIQPGALSVIKAIANDVNSSNINSVFHIGDISYATGFLVEWDFFLSLINPVASRVSYMTAIGNHERDYINSGSIYVTPDSGGECGVPYETYFQMPTAAKDKPWYSIEQGSVHFTIISTEHDWSEKSEQYQWMQKDMASVNRQKTPWLIFMGHRQMYSSCHSLLSTEELFKDSVEPLLLENKVDLVLVGHVHNYERTCSVFQGECKAMPTKDKNGVDTYNGRNYSAPVHVVIGMAGFSLDKFPDQVEKWSLKRISEYGYFRAHATRNDLNLEFVVSDTREVKDSFHITK 633
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00136 633 PANTHER PURPLE ACID PHOSPHATASE 13 633 - -
Cca04g00136 633 CDD MPP_PAPs 325 633 IPR041792 -
Cca04g00136 633 Gene3D - 322 633 IPR029052 -
Cca04g00136 633 Pfam Iron/zinc purple acid phosphatase-like protein C 570 628 IPR025733 -
Cca04g00136 633 Gene3D - 214 321 - -
Cca04g00136 633 Pfam Purple acid Phosphatase, N-terminal domain 218 317 IPR015914 GO:0003993|GO:0046872
Cca04g00136 633 Pfam Fn3-like domain from Purple Acid Phosphatase 81 210 IPR040974 -
Cca04g00136 633 PANTHER PURPLE ACID PHOSPHATASE-RELATED 13 633 - -
Cca04g00136 633 SUPERFAMILY Purple acid phosphatase, N-terminal domain 203 319 IPR008963 GO:0003993|GO:0046872
Cca04g00136 633 SUPERFAMILY Metallo-dependent phosphatases 326 625 IPR029052 -
Cca04g00136 633 Pfam Calcineurin-like phosphoesterase 326 538 IPR004843 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00136 Cca-Chr4 1275126 1283402 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00136 74 631 Miscellaneous Gene Families AT2G03450 30.323 1.93e-68 233
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00136 K22390 - gmx:100775839 1083.55