Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00131 atgggggggttgggcaagaccacccttgcccgaaaagtttataatgatagcaagGTGAAACAAGGCTTTAGTTGTTGTGTTTGGGTGTACGTGTCAAACGAGTGTAGAGCTAAGGAGCTTTTGCTTAGTCTTCTTAAGCATTTGAGGCCAAACCTCGAAACTGAACTTCAAGAAGAAAACAACAAAGGAAAAAAATTCACTGAAGAACAAGACATTTTTAACTTGAGTGTGGAGGAGCTGAAGAAACTGGTGCGGCAATACTTGGAGAGGAAAACAAGGTATCTGGTGGTCCTCGATGACTTGTGGAAAACACAAGATTGGGACGAGGTGCAAGATGCTTTTCCCGACAACAACAGAGGCAACAGAATATTGATCACTAGTCGTTTGAAAGAGGTGGCCTTGCATACTAGTCTTCATCCTCCATACTACCTTCAATTTCTCAGCCAAGAAGAAAGCTGGGAGCTCTTTCGTAGGAAAGTGTTTAGAGGGGAAGAATGCCCTTTTGAACTAGAGCCTCTAGGCAAACAAATAGTGGCAAGTTGTCGCGGTTTGCCACTCTCTATTGTTGTATTAGCAGGATTGCTAGCCAACAAGGAAAAGTCACACAGGGAATGGTCCAAAGTGGTGGGTCACGTCAACTGGTATCTTACTCAAGACGAGACTCAAGTGAAGGATATAGTTCTGAAGCTCAGTTATGATAACTTGCCAAGAAGATTGAAACCATGCTTTCTATATTTTGGGATATTCCCTGAAGACTTTGAAATCCCTGTTAGGCCATTACTACAACAATGGGTTGCAGAAGGGTTTATACAAGAAACAAGAAATAGAGACCCAGATGATGTGGCAGAAGACTACTTGTACGAGCTCATTGATCGTAGTTTGGTCCAAGTAGCAGCAATAAAGACTAGTGGAGGTGTGAAAACTTGTCACATCCATGATCTTCTCCGAGATCTTTGTGTATCGCAGAGCAAAGGGGACAAGATTTTTGAAGTCTGCTCAGATAATGACATTCAAATTCTAACAAAACCTCGCAGGTTGTCCTTCCATTGTGACATGGGCCACTACATTTCTTCAAGCAACAAAGACCATTCATGTATCCGTTCTTTGTTCTTCTTTGGAATATATTCCAATTTTACTGGGAACGAGTGGGAATGGCTTTTCAAAGGCTTCAAATTGGTTCGAGTGTTAGAGCTTGGAAAAAACCATTGCGCAGGAAAGATCCCATCTAATTTGGGGGACTTTATCCACTTAAGGTATTTGAGAATTGACTCGAATTTTGGTATAATTATTCCAACTTCCATACTTACCCTTCAGAATTTACAAACAGTAGATTTAGGTAATTGGTTTAGGGAAATCCCAATTTGTTTCCCTGCTCAAATGTGGAAGCTCAAACATTTAAGGCACCTGTATGGGCAAGGACCTGTGAAGCTTCAAGGCCACTATTCAGGATCAAATGAGGTTATGTGGAATCTCCGAACCATCTTCCCCATTGATATTGATACACAAACATTGTCTCTGATGAAGAAAGGAAGCTTCCCCAATCTTGTGAAATTGGGGTTGTCAATCAATTCGGACCGCCAAGGTAAGTGGCCAAAGTTGTTGCAGAGCTTACAAGAATTAAGTCATTTGAATATCTTAAAGATTTGCCTCCGAGGGGATTTTGATGCTTCAATAGGCACAGTGTCAAGCATATGGCGGTTTGGTTGTGAGCCACAGGAGCTATTACAAAGCCTAGGGTTGTTGACTCATATAACTACGTTGAAAATCACCAATATCTGCAGCCTTATGATAACGGTTCCTCCAAATGTCACCAAGTTAACATTGCGTGGTATTAGTAGCATCACTAGGGAGGGGCTGAATGCGTTGAGAAATCACACCAAACTCCAAATTTTGAGTCTATATGGAGACTATGGCTCTAACATTAACCTCAATTGTGTTGTAGGCTATGGATGA 1953 0.403 MGGLGKTTLARKVYNDSKVKQGFSCCVWVYVSNECRAKELLLSLLKHLRPNLETELQEENNKGKKFTEEQDIFNLSVEELKKLVRQYLERKTRYLVVLDDLWKTQDWDEVQDAFPDNNRGNRILITSRLKEVALHTSLHPPYYLQFLSQEESWELFRRKVFRGEECPFELEPLGKQIVASCRGLPLSIVVLAGLLANKEKSHREWSKVVGHVNWYLTQDETQVKDIVLKLSYDNLPRRLKPCFLYFGIFPEDFEIPVRPLLQQWVAEGFIQETRNRDPDDVAEDYLYELIDRSLVQVAAIKTSGGVKTCHIHDLLRDLCVSQSKGDKIFEVCSDNDIQILTKPRRLSFHCDMGHYISSSNKDHSCIRSLFFFGIYSNFTGNEWEWLFKGFKLVRVLELGKNHCAGKIPSNLGDFIHLRYLRIDSNFGIIIPTSILTLQNLQTVDLGNWFREIPICFPAQMWKLKHLRHLYGQGPVKLQGHYSGSNEVMWNLRTIFPIDIDTQTLSLMKKGSFPNLVKLGLSINSDRQGKWPKLLQSLQELSHLNILKICLRGDFDASIGTVSSIWRFGCEPQELLQSLGLLTHITTLKITNICSLMITVPPNVTKLTLRGISSITREGLNALRNHTKLQILSLYGDYGSNINLNCVVGYG 650
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00131 650 PRINTS Disease resistance protein signature 88 102 - -
Cca04g00131 650 PRINTS Disease resistance protein signature 181 195 - -
Cca04g00131 650 PRINTS Disease resistance protein signature 435 451 - -
Cca04g00131 650 Pfam NB-ARC domain 1 234 IPR002182 GO:0043531
Cca04g00131 650 Coils Coil 42 69 - -
Cca04g00131 650 PANTHER DISEASE RESISTANCE PROTEIN RP 1 584 IPR044974 GO:0006952
Cca04g00131 650 Gene3D - 146 231 IPR042197 -
Cca04g00131 650 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 246 IPR027417 -
Cca04g00131 650 Gene3D Ribonuclease Inhibitor 350 646 IPR032675 -
Cca04g00131 650 Gene3D - 232 323 IPR036388 -
Cca04g00131 650 SUPERFAMILY L domain-like 311 635 - -
Cca04g00131 650 Gene3D - 1 139 IPR027417 -
Cca04g00131 650 PANTHER - 1 584 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00131 Cca-Chr4 1225751 1227703 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00131 378 591 Receptor kinase-like Gene Family AT1G17750 26.295 3.10e-07 52.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00131 - - gmx:100814688 869.381