Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00122 ATGGCTCCAACGGAATCATCTCTTCTTCTTCCTTCGGGTTCAGGGAGGAGCAACAAGAAGGAGGCTTCAGGAGACAAATGGGATTTAGCGTACATAGTGTATTTCACGCTGGGCCTGGGTTACCTTCTCCCGTGGAACGCTTTCATCACAGCCGTTGATTACTTCGCCTACCTCTACCCCGATGCCAGCGTCGATCGCATCTTCGCCGTTGTTTACATGCTCATCGGCCTCATCGGAATCTTCCTCATCATCCTCTTCAGCCACAAATCCCACGCCTTTGTCAGAATCAACGTTGGCTTGCTCCTCTTCGTTATTTCCCTCCTCGCCGTTCCCCTTATCGACGCCTTCTACGTTAAGGGCCGCGTCGGACTTTACAAAGGCTTCTACGCCACCACCGCCGCTGTTGCACTTTCCGGCGTGGCGGATGCTCTTGTGCAGGGCTCCATTGTCGGCTCCGCCGGCGAGTTGCCGGAGAGGTACATGCAAGCTGTCATCGCCGGGACTGCCGGTTCTGGTATCGCCTCCTACTAA 531 0.5518 MAPTESSLLLPSGSGRSNKKEASGDKWDLAYIVYFTLGLGYLLPWNAFITAVDYFAYLYPDASVDRIFAVVYMLIGLIGIFLIILFSHKSHAFVRINVGLLLFVISLLAVPLIDAFYVKGRVGLYKGFYATTAAVALSGVADALVQGSIVGSAGELPERYMQAVIAGTAGSGIASY 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00122 176 MobiDBLite consensus disorder prediction 1 22 - -
Cca04g00122 176 Pfam Nucleoside transporter 133 174 IPR002259 GO:0005337|GO:0016021|GO:1901642
Cca04g00122 176 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 19 173 IPR002259 GO:0005337|GO:0016021|GO:1901642
Cca04g00122 176 MobiDBLite consensus disorder prediction 1 18 - -
Cca04g00122 176 PANTHER EQUILIBRATIVE NUCLEOTIDE TRANSPORTER 8 19 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00122 Cca-Chr4 1125233 1125763 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Cca04g00122 5 173 Organic Solute Cotransporters AT1G70330 65.294 1.94e-65 205
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00122 K15014 - gmx:100793043 275.404