Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00121 ATGGAAATTCTCGCATGTGGATCTGGACCATGCAGTCAAGTAGTGGATACGAAGTGGAAATTCGTTGACAAAACCTTGAATTCACGTCAAACAAGGTTTCCCTCGGTTGGAAATCGTGGAGTTTCTTATACAAACACCAATTCTAGAAGCGGGTCAGTGAGATTTCATGATAATAAGGAGCAGCAAAGAGATTTAGCGTCTTTGAGTAGTCTTGGAGGGTCCAAAAGAATCAATTGCAAGGTCTATAGTGAAAGTTATGAAGGCTATGTGATTGGTGGTGAAGAGGATGTAACAGATATTTCAGATGCTACTAACATTGTGGTTCCAGGTGTACCTGATGGGTCCAATGGTGAATCTGGTGCTCCAATAAGTAGTTGCTTTTGGGAATGGAAGCCTAAACTTAACGTGCACTATGAGAAGGCAGGGTGTGAGAACGTGGATTCCCCAAATGTTCTCTTTCTTCCTGGTTTTGGTGTTGGCTCTTTCCATTATGAAAAGCAAATGAAAGATTTGGGTCGTGACACCAGAGTATGGGCACTGGATTTTCTAGGCCAAGGATTGTCCTTGCCCTTTGAAGATCCGGCTCCTCACTATAAGGAAAGGGCTACATCAAATGCAAATGCTTCTTCTTCTTCTTCATGGGGATTCGGAGATGAAACGGAACCATGGGCCACTAAGCTTGTGTACTCTATTGATTTATGGCAAGAACAAGTTCGATACTTCATAGAAGAGGTCATCGGTGAACCAGTCTACGTTGTGGGGAACTCACTAGGAGGATATGTTGCAATGTATTTTGCAGCACTTAACCCTCATTTAGTGAAAGGTGTCACACTGCTTAATGCAACACCTTTTTGGGGGTTTCTTCCTAATCCTATAAAGAATCCAGGCCTAGCCAAATTGTTTCCATGGGCTGGAACATTTCCTCTACCTGCTAATGTAAGGAGGTTGACAGAGTTGGTGTGGGAGAAAATCAGCGATCCTACAAGTATTGCGGAGGTACTTAATCAGGTTTATGCAGAGCGTTCAACAAATGTAGAGAGTGTATTTTCACGCATAATTGAAACCACAAGGCATCCTGCAGCAGCAGCAGCATTTGCTTCAATTATGTTTGCTCCCCAGGCAGAATTATCATTCAGTGAAGCGTTATCTAGATGTCGAAAAAACAATGTGCCAATCTGCCTCATGTATGGAAAAGAAGATCCTTGGGTGAAGCCACTTTGGGGACTCCAGGTTAAAAGGCAGGTCCCTGAAGCTCCATATTATCAAATCAGCCCTGCTGGTCACTGTCCTCATGATGAAGTCCCTGAGGTCATAAATTTCTTGCTACGTGGGTGGATCAGAAATCTAGAGTCTCAGGGTTCGATCTCTTTGCCACTGCTTGATGAGCTAGAGTGTGTTCAACACGCTAATGGCAGGGAGTTAGAATTTATGAGAGAAGGTTCAAGAAAATTAGTGACGGTGAGATTTTTCAGCTCAAGATTTTCGCTTTGGGACAGTATAAGATCTTACATCAAGCCTCGCTCCAAGTTAAGAAATTCGGCCACCAATTCTCAATGA 1557 0.4322 MEILACGSGPCSQVVDTKWKFVDKTLNSRQTRFPSVGNRGVSYTNTNSRSGSVRFHDNKEQQRDLASLSSLGGSKRINCKVYSESYEGYVIGGEEDVTDISDATNIVVPGVPDGSNGESGAPISSCFWEWKPKLNVHYEKAGCENVDSPNVLFLPGFGVGSFHYEKQMKDLGRDTRVWALDFLGQGLSLPFEDPAPHYKERATSNANASSSSSWGFGDETEPWATKLVYSIDLWQEQVRYFIEEVIGEPVYVVGNSLGGYVAMYFAALNPHLVKGVTLLNATPFWGFLPNPIKNPGLAKLFPWAGTFPLPANVRRLTELVWEKISDPTSIAEVLNQVYAERSTNVESVFSRIIETTRHPAAAAAFASIMFAPQAELSFSEALSRCRKNNVPICLMYGKEDPWVKPLWGLQVKRQVPEAPYYQISPAGHCPHDEVPEVINFLLRGWIRNLESQGSISLPLLDELECVQHANGRELEFMREGSRKLVTVRFFSSRFSLWDSIRSYIKPRSKLRNSATNSQ 518
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00121 518 MobiDBLite consensus disorder prediction 37 52 - -
Cca04g00121 518 Gene3D alpha/beta hydrolase 116 449 IPR029058 -
Cca04g00121 518 MobiDBLite consensus disorder prediction 37 59 - -
Cca04g00121 518 Pfam Alpha/beta hydrolase family 151 437 IPR000073 -
Cca04g00121 518 PANTHER PHEOPHYTINASE, CHLOROPLASTIC 1 509 IPR044211 GO:0015996|GO:0080124
Cca04g00121 518 SUPERFAMILY alpha/beta-Hydrolases 122 448 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00121 Cca-Chr4 1117366 1120585 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00121 - - gmx:100791985 879.782