Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00120 ATGATGAGAACGCTATCTACCCAATTTCGCTCCGTCAAACGCCCAAATCCAAACCCTAAATTATCCAAATCGTCGTCTCCTGCAAAATCAGAAAACGCCAAACCAAAATCAGAGCCATGGTGCGTTTATCTCATCCTCTCCACCAACCATCCAATCAAAACCTACGTTGGGGTCACAAACAATTTCCCTCGCCGTTTGAAGCAGCATAACGGTGAACTTAAAGGTGGTGCAAAGGCATCCCGTGCTGGAAGGCCTTGGATTTGTGCATGCATCGTTTGTGGTTTTACAGACCGAAGTGATGCTTGTGTATTTGAATCAAAATGGAAAGCTTTCTCAAGGAGAGCTCCCCGCAAAAATAAAAATGACGATCTCTCCATGCAAAGTGAAGATCCATCATTACCACTACTGCGACACAGACAAGCAGCTTTGAGTAGAGTGAAAGGTTCACTTGACTGCACTAACTTACAAATTATTTGGCATTTGGATCCATTGTGA 495 0.4384 MMRTLSTQFRSVKRPNPNPKLSKSSSPAKSENAKPKSEPWCVYLILSTNHPIKTYVGVTNNFPRRLKQHNGELKGGAKASRAGRPWICACIVCGFTDRSDACVFESKWKAFSRRAPRKNKNDDLSMQSEDPSLPLLRHRQAALSRVKGSLDCTNLQIIWHLDPL 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00120 164 ProSiteProfiles GIY-YIG domain profile. 38 120 IPR000305 -
Cca04g00120 164 Gene3D - 34 132 IPR035901 -
Cca04g00120 164 MobiDBLite consensus disorder prediction 1 32 - -
Cca04g00120 164 PANTHER EMB|CAB76036.1 18 163 - -
Cca04g00120 164 SUPERFAMILY GIY-YIG endonuclease 39 113 IPR035901 -
Cca04g00120 164 Pfam GIY-YIG catalytic domain 40 114 IPR000305 -
Cca04g00120 164 PANTHER STRUCTURE-SPECIFIC ENDONUCLEASE SUBUNIT SLX1 18 163 - -
Cca04g00120 164 MobiDBLite consensus disorder prediction 1 34 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00120 K15078 - gmx:100805152 270.396