Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00092 ATGGCATCAATCACCATGACAGCATCATTCCTTGGCACCTCAACCATCGGCCACCGGTCTCCGGTGGCGTCGCAGAGGAGGCTGGTGGTGGCAAATTCTGCCAAATCAGTTGAAGGAGAAAAGGTGAAGATGAGTTATGAGAATGAGAAAGAAGGAAGCAATGGAAGGAGGAACATGATGTTTgctgctgctgctgcagctgtttgctctgttgctgggatggctgtggcagatgagcccaaacgtggcaCCCCTGAAGCTAGGAAACTCTATTCCCCTGTTTGTGTCACTATGCCAACAGCCAGGATTTGTCACAAGTGA 321 0.3863 MASITMTASFLGTSTIGHRSPVASQRRLVVANSAKSVEGEKVKMSYENEKEGSNGRRNMMFAAAAAAVCSVAGMAVADEPKRGTPEARKLYSPVCVTMPTARICHK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00092 106 PANTHER PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC 1 106 IPR040296 -
Cca04g00092 106 PANTHER PHOTOSYSTEM II 5 KDA PROTEIN, CHLOROPLASTIC 1 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Cca04g00092 Cca-Chr4 823416 824334 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00092 - - adu:107477533 152.525