Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cca04g00090 ATGGAAGATGATTGGGTTGAAGTCAAAGTTCCTGATGTTGCAAAACACTCCGCCAAAACCTCTCAGGATCTTTATGAGGCTACGGCAGAGATTGATGATGCAAATCCTTGCATTTCTGTTACACTTCGTTTGCTCTCGCTTCAGAATAAAGGCTGTGTTTATGTTGATGAGATTTATGTGTTTGCGGATCCTGTTGATTCAGCTGATACAGAAAGCCAGGAAAGCCATAATGAAAACACATCTGGCAGTTCCCTCATGGCTATGTTTCTGCCCACTCTAATGCAATTATCCAAGACAAAAGGGCTCAGCAATCTAAATGCTCTAAGAAAGGAAAATCAACATGTTTTGGGGAATGATTTGGAAGCAACTCATCCAAGTGATTCTGTAATTAAAACTCAGCTAAAAGGAGAAGCTACCATAACTGATCCTCAAGAAGTGAAGTTGAATGAGGTGCAAGGTGGTTGGATGGGTCCACACCCGCTAGATACATTCTCACAACTTGCTAAAATGGAGGGAAACCATACTTCAGTACCCTCACAAACTACTAAAATCAACAACACTCACAGTTTCATACCCTCAAAAATTGCTGAAAAGGAGAACGACCACAGTGCCATTCCCTTTCAAAGTGCTAAAACAGAGTGCAATATTAATTCTGTCCCCATGCAAGTGGCTATTTCTGAGAGCAATCCTGGTGATTCTTTGGGTGGTAATGTTGAAAGGGTCCTGGAACAGCTTGTATCACGCATGGACAGGATAGAAGAAATCTGTTTGGGCTTTCAAGAGAAAATGGTGCTGCCCATGAACAGCATTGAGGCAAGACTCCAGCGAGTTGAGCAGCAACTGGATACACTGACTAAGAAATCACAGAATTCGACATTGCCATCATGTTCTAGAATTTTCGCTCCTGATGCTTCTTGTAGTGATTCAGATGCCATCTCCTGTGACAATTGTCCTGATTATGCTGCCACTAAGGAAAGTGAATCAGATGAGAAACATTTACACACAGAGGTAAGATATGTCTCTGCTCATATATCTGATTCAGCAAATACTACTCAATTGCTCCCAGGTCTTGTAGTTACAGCTCCCGAGTTTCCTGATGGTGAGGATGAGGAAGTTGATGCATCGGGACTAGAAACAGATGTGGATGAAAAAGTTGATGCATCAGGACTAGAAGCAGACAAGGATGAAGAAGTTGATGCATCAGGACTAGAAGCAGACAAGGATGAAGAAGTTGATGCATCAGGGCTAGAAGCAGATGAGGATGAAGAAGTTGATGCATCAGGACCAGAAACAGATTCTTCAAAAAATAAAGCAAAGCAGTCAATTGATGATGCTTTATCTTCTGCTTTAGCTAATTTTTTGTCTTCCACGCCTTTAAATTCTCCAAAGTATACTAAAAGTCTAACTGTTAAAGCCCCCGAGTTTTTAAATGAAGATGCTGACGACCATGAGAGCAATAGTCAGATAGTGAAAAATGACTCAGTTCATCTCACAGACAGGGAGGAATTTGGTCACATCCAAGTGTTGGCTTCATCCAATACTTCGTTGGAAAATAGTGAGAAGATAAACCCAGATTCTAATGATAAAAACTCTGAAAATACTTCCCAGGAAGCTGAAGAACATGACCAATTTTGCAGTGCAGAAGGAGATCAAGATGAGGCAACTTTGAAAACTACTGAACATAGTCCAAAAGCAGATGTTGTTGACAACTTTGAAGAAGACAAAAATGGAAAAATCAATGGTAAGAAAAGTGATGGTTTGTCGTCCAATACAAGTGATATTTCAAATGGGTTGCTCGACAATCTGACCCCCTGCGGTTACAATAGTATCAATGAGGAAGAACCACTCTCAGGGACTGAACTTactgttgcatcagaggtctcaaggaaaacccatgagaacatcatagagaatgTTCTTGGATTTTCACTTGCTTCCTCCATTGTAGATTTTGAAAACCCAATCTTGGATGTGAAATTCATTTCTCAGAGAACTCCTGCTACAGAGAGTTTCCTTGAAGATTTTCTGGTTGAAACACAAGAGGCCAAGGAAAGCAATGGTGATTTTCCTGTACTGAAAAGCAATGGTGATCTCTCGGTTGAGGAGCAGTCTAATTTGATTTCAATAGAAGATGGGGAACTGGTGAATCCAACTAGCGATAGCCATTTTGCTGTGGACAAAGACTTGTGTACTTCGATTGCTGCTGAACCTGTGAACATCGAAGGTGATAATCTGCCAGTGCTGGAGGATCATAAGCGAAAACGTGATCAAATGTCTTCAAGTCTCATATGA 2292 0.4005 MEDDWVEVKVPDVAKHSAKTSQDLYEATAEIDDANPCISVTLRLLSLQNKGCVYVDEIYVFADPVDSADTESQESHNENTSGSSLMAMFLPTLMQLSKTKGLSNLNALRKENQHVLGNDLEATHPSDSVIKTQLKGEATITDPQEVKLNEVQGGWMGPHPLDTFSQLAKMEGNHTSVPSQTTKINNTHSFIPSKIAEKENDHSAIPFQSAKTECNINSVPMQVAISESNPGDSLGGNVERVLEQLVSRMDRIEEICLGFQEKMVLPMNSIEARLQRVEQQLDTLTKKSQNSTLPSCSRIFAPDASCSDSDAISCDNCPDYAATKESESDEKHLHTEVRYVSAHISDSANTTQLLPGLVVTAPEFPDGEDEEVDASGLETDVDEKVDASGLEADKDEEVDASGLEADKDEEVDASGLEADEDEEVDASGPETDSSKNKAKQSIDDALSSALANFLSSTPLNSPKYTKSLTVKAPEFLNEDADDHESNSQIVKNDSVHLTDREEFGHIQVLASSNTSLENSEKINPDSNDKNSENTSQEAEEHDQFCSAEGDQDEATLKTTEHSPKADVVDNFEEDKNGKINGKKSDGLSSNTSDISNGLLDNLTPCGYNSINEEEPLSGTELTVASEVSRKTHENIIENVLGFSLASSIVDFENPILDVKFISQRTPATESFLEDFLVETQEAKESNGDFPVLKSNGDLSVEEQSNLISIEDGELVNPTSDSHFAVDKDLCTSIAAEPVNIEGDNLPVLEDHKRKRDQMSSSLI 763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cca04g00090 763 MobiDBLite consensus disorder prediction 476 503 - -
Cca04g00090 763 MobiDBLite consensus disorder prediction 522 581 - -
Cca04g00090 763 MobiDBLite consensus disorder prediction 507 521 - -
Cca04g00090 763 MobiDBLite consensus disorder prediction 397 427 - -
Cca04g00090 763 MobiDBLite consensus disorder prediction 361 441 - -
Cca04g00090 763 MobiDBLite consensus disorder prediction 476 588 - -
Cca04g00090 763 PANTHER 40S RIBOSOMAL PROTEIN S27 2 763 - -
Cca04g00090 763 Coils Coil 267 287 - -
Cca04g00090 763 MobiDBLite consensus disorder prediction 378 396 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cca04g00090 - - ccaj:109798690 1486.86